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Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids
BACKGROUND: Glucocorticoids (GC) represent the core treatment modality for many inflammatory diseases. Its mode of action is difficult to grasp, not least because it includes direct modulation of many components of the extracellular matrix as well as complex anti-inflammatory effects. Protein expres...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901312/ https://www.ncbi.nlm.nih.gov/pubmed/20509951 http://dx.doi.org/10.1186/1742-4682-7-16 |
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author | Klinge, Uwe Farman, Nicolette Fiebeler, Anette |
author_facet | Klinge, Uwe Farman, Nicolette Fiebeler, Anette |
author_sort | Klinge, Uwe |
collection | PubMed |
description | BACKGROUND: Glucocorticoids (GC) represent the core treatment modality for many inflammatory diseases. Its mode of action is difficult to grasp, not least because it includes direct modulation of many components of the extracellular matrix as well as complex anti-inflammatory effects. Protein expression profile of skin proteins is being changed with topical application of GC, however, the knowledge about singular markers in this regard is only patchy and collaboration is ill defined. MATERIAL/METHODS: Scar formation was observed under different doses of GC, which were locally applied on the back skin of mice (1 to 3 weeks). After euthanasia we analyzed protein expression of collagen I and III (picrosirius) in scar tissue together with 16 additional protein markers, which are involved in wound healing, with immunhistochemistry. For assessing GC's effect on co-expression we compared our results with a model of random figures to estimate how many significant correlations should be expected by chance. RESULTS: GC altered collagen and protein expression with distinct results in different areas of investigation. Most often we observed a reduced expression after application of low dose GC. In the scar infiltrate a multivariate analysis confirmed the significant impact of both GC concentrations. Calculation of Spearman's correlation coefficient similarly resulted in a significant impact of GC, and furthermore, offered the possibility to grasp the entire interactive profile in between all variables studied. The biological markers, which were connected by significant correlations could be arranged in a highly cross-linked network that involved most of the markers measured. A marker highly cross-linked with more than 3 significant correlations was indicated by a higher variation of all its correlations to the other variables, resulting in a standard deviation of > 0.2. CONCLUSION: In addition to immunohistochemical analysis of single protein markers multivariate analysis of co-expressions by use of correlation coefficients reveals the complexity of biological relationships and identifies complex biological effects of GC on skin scarring. Depiction of collaborative clusters will help to understand functional pathways. The functional importance of highly cross-linked proteins will have to be proven in subsequent studies. |
format | Text |
id | pubmed-2901312 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-29013122010-07-10 Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids Klinge, Uwe Farman, Nicolette Fiebeler, Anette Theor Biol Med Model Research BACKGROUND: Glucocorticoids (GC) represent the core treatment modality for many inflammatory diseases. Its mode of action is difficult to grasp, not least because it includes direct modulation of many components of the extracellular matrix as well as complex anti-inflammatory effects. Protein expression profile of skin proteins is being changed with topical application of GC, however, the knowledge about singular markers in this regard is only patchy and collaboration is ill defined. MATERIAL/METHODS: Scar formation was observed under different doses of GC, which were locally applied on the back skin of mice (1 to 3 weeks). After euthanasia we analyzed protein expression of collagen I and III (picrosirius) in scar tissue together with 16 additional protein markers, which are involved in wound healing, with immunhistochemistry. For assessing GC's effect on co-expression we compared our results with a model of random figures to estimate how many significant correlations should be expected by chance. RESULTS: GC altered collagen and protein expression with distinct results in different areas of investigation. Most often we observed a reduced expression after application of low dose GC. In the scar infiltrate a multivariate analysis confirmed the significant impact of both GC concentrations. Calculation of Spearman's correlation coefficient similarly resulted in a significant impact of GC, and furthermore, offered the possibility to grasp the entire interactive profile in between all variables studied. The biological markers, which were connected by significant correlations could be arranged in a highly cross-linked network that involved most of the markers measured. A marker highly cross-linked with more than 3 significant correlations was indicated by a higher variation of all its correlations to the other variables, resulting in a standard deviation of > 0.2. CONCLUSION: In addition to immunohistochemical analysis of single protein markers multivariate analysis of co-expressions by use of correlation coefficients reveals the complexity of biological relationships and identifies complex biological effects of GC on skin scarring. Depiction of collaborative clusters will help to understand functional pathways. The functional importance of highly cross-linked proteins will have to be proven in subsequent studies. BioMed Central 2010-05-28 /pmc/articles/PMC2901312/ /pubmed/20509951 http://dx.doi.org/10.1186/1742-4682-7-16 Text en Copyright ©2010 Klinge et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Klinge, Uwe Farman, Nicolette Fiebeler, Anette Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
title | Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
title_full | Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
title_fullStr | Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
title_full_unstemmed | Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
title_short | Evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
title_sort | evaluation of the collaborative network of highly correlating skin proteins and its change following treatment with glucocorticoids |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901312/ https://www.ncbi.nlm.nih.gov/pubmed/20509951 http://dx.doi.org/10.1186/1742-4682-7-16 |
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