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Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study

Brain functional connectivity (FC) is often assessed from fMRI data using seed-based methods, such as those of detecting temporal correlation between a predefined region (seed) and all other regions in the brain; or using multivariate methods, such as independent component analysis (ICA). ICA is a u...

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Autores principales: Kelly, Robert E., Wang, Zhishun, Alexopoulos, George S., Gunning, Faith M., Murphy, Christopher F., Morimoto, Sarah Shizuko, Kanellopoulos, Dora, Jia, Zhiru, Lim, Kelvin O., Hoptman, Matthew J.
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2905944/
https://www.ncbi.nlm.nih.gov/pubmed/20689712
http://dx.doi.org/10.1155/2010/868976
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author Kelly, Robert E.
Wang, Zhishun
Alexopoulos, George S.
Gunning, Faith M.
Murphy, Christopher F.
Morimoto, Sarah Shizuko
Kanellopoulos, Dora
Jia, Zhiru
Lim, Kelvin O.
Hoptman, Matthew J.
author_facet Kelly, Robert E.
Wang, Zhishun
Alexopoulos, George S.
Gunning, Faith M.
Murphy, Christopher F.
Morimoto, Sarah Shizuko
Kanellopoulos, Dora
Jia, Zhiru
Lim, Kelvin O.
Hoptman, Matthew J.
author_sort Kelly, Robert E.
collection PubMed
description Brain functional connectivity (FC) is often assessed from fMRI data using seed-based methods, such as those of detecting temporal correlation between a predefined region (seed) and all other regions in the brain; or using multivariate methods, such as independent component analysis (ICA). ICA is a useful data-driven tool, but reproducibility issues complicate group inferences based on FC maps derived with ICA. These reproducibility issues can be circumvented with hybrid methods that use information from ICA-derived spatial maps as seeds to produce seed-based FC maps. We report results from five experiments to demonstrate the potential advantages of hybrid ICA-seed-based FC methods, comparing results from regressing fMRI data against task-related a priori time courses, with “back-reconstruction” from a group ICA, and with five hybrid ICA-seed-based FC methods: ROI-based with (1) single-voxel, (2) few-voxel, and (3) many-voxel seed; and dual-regression-based with (4) single ICA map and (5) multiple ICA map seed.
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spelling pubmed-29059442010-08-05 Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study Kelly, Robert E. Wang, Zhishun Alexopoulos, George S. Gunning, Faith M. Murphy, Christopher F. Morimoto, Sarah Shizuko Kanellopoulos, Dora Jia, Zhiru Lim, Kelvin O. Hoptman, Matthew J. Int J Biomed Imaging Research Article Brain functional connectivity (FC) is often assessed from fMRI data using seed-based methods, such as those of detecting temporal correlation between a predefined region (seed) and all other regions in the brain; or using multivariate methods, such as independent component analysis (ICA). ICA is a useful data-driven tool, but reproducibility issues complicate group inferences based on FC maps derived with ICA. These reproducibility issues can be circumvented with hybrid methods that use information from ICA-derived spatial maps as seeds to produce seed-based FC maps. We report results from five experiments to demonstrate the potential advantages of hybrid ICA-seed-based FC methods, comparing results from regressing fMRI data against task-related a priori time courses, with “back-reconstruction” from a group ICA, and with five hybrid ICA-seed-based FC methods: ROI-based with (1) single-voxel, (2) few-voxel, and (3) many-voxel seed; and dual-regression-based with (4) single ICA map and (5) multiple ICA map seed. Hindawi Publishing Corporation 2010 2010-06-28 /pmc/articles/PMC2905944/ /pubmed/20689712 http://dx.doi.org/10.1155/2010/868976 Text en Copyright © 2010 Robert E. Kelly et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kelly, Robert E.
Wang, Zhishun
Alexopoulos, George S.
Gunning, Faith M.
Murphy, Christopher F.
Morimoto, Sarah Shizuko
Kanellopoulos, Dora
Jia, Zhiru
Lim, Kelvin O.
Hoptman, Matthew J.
Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study
title Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study
title_full Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study
title_fullStr Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study
title_full_unstemmed Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study
title_short Hybrid ICA-Seed-Based Methods for fMRI Functional Connectivity Assessment: A Feasibility Study
title_sort hybrid ica-seed-based methods for fmri functional connectivity assessment: a feasibility study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2905944/
https://www.ncbi.nlm.nih.gov/pubmed/20689712
http://dx.doi.org/10.1155/2010/868976
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