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Local alignment of generalized k-base encoded DNA sequence
BACKGROUND: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however observe an encoded form of the sequence, rather than each DNA base individually. The encoded DNA sequence may contain tech...
Autores principales: | Homer, Nils, Nelson, Stanley F, Merriman, Barry |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2911458/ https://www.ncbi.nlm.nih.gov/pubmed/20576157 http://dx.doi.org/10.1186/1471-2105-11-347 |
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