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Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections

BACKGROUND: Campylobacter jejuni is the most common bacterial cause of human gastroenteritis worldwide. Due to the sporadic nature of infection, sources often remain unknown. Multilocus sequence typing (MLST) has been successfully applied to population genetics of Campylobacter jejuni and mathematic...

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Autores principales: de Haan, Caroline PA, Kivistö, Rauni I, Hakkinen, Marjaana, Corander, Jukka, Hänninen, Marja-Liisa
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2914712/
https://www.ncbi.nlm.nih.gov/pubmed/20659332
http://dx.doi.org/10.1186/1471-2180-10-200
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author de Haan, Caroline PA
Kivistö, Rauni I
Hakkinen, Marjaana
Corander, Jukka
Hänninen, Marja-Liisa
author_facet de Haan, Caroline PA
Kivistö, Rauni I
Hakkinen, Marjaana
Corander, Jukka
Hänninen, Marja-Liisa
author_sort de Haan, Caroline PA
collection PubMed
description BACKGROUND: Campylobacter jejuni is the most common bacterial cause of human gastroenteritis worldwide. Due to the sporadic nature of infection, sources often remain unknown. Multilocus sequence typing (MLST) has been successfully applied to population genetics of Campylobacter jejuni and mathematical modelling can be applied to the sequence data. Here, we analysed the population structure of a total of 250 Finnish C. jejuni isolates from bovines, poultry meat and humans collected in 2003 using a combination of Bayesian clustering (BAPS software) and phylogenetic analysis. RESULTS: In the first phase we analysed sequence types (STs) of 102 Finnish bovine C. jejuni isolates by MLST and found a high diversity totalling 50 STs of which nearly half were novel. In the second phase we included MLST data from domestic human isolates as well as poultry C. jejuni isolates from the same time period. Between the human and bovine isolates we found an overlap of 72.2%, while 69% of the human isolates were overlapping with the chicken isolates. In the BAPS analysis 44.3% of the human isolates were found in bovine-associated BAPS clusters and 45.4% of the human isolates were found in the poultry-associated BAPS cluster. BAPS reflected the phylogeny of our data very well. CONCLUSIONS: These findings suggest that bovines and poultry were equally important as reservoirs for human C. jejuni infections in Finland in 2003. Our results differ from those obtained in other countries where poultry has been identified as the most important source for human infections. The low prevalence of C. jejuni in poultry flocks in Finland could explain the lower attribution of human infection to poultry. Of the human isolates 10.3% were found in clusters not associated with any host which warrants further investigation, with particular focus on waterborne transmission routes and companion animals.
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spelling pubmed-29147122010-08-04 Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections de Haan, Caroline PA Kivistö, Rauni I Hakkinen, Marjaana Corander, Jukka Hänninen, Marja-Liisa BMC Microbiol Research Article BACKGROUND: Campylobacter jejuni is the most common bacterial cause of human gastroenteritis worldwide. Due to the sporadic nature of infection, sources often remain unknown. Multilocus sequence typing (MLST) has been successfully applied to population genetics of Campylobacter jejuni and mathematical modelling can be applied to the sequence data. Here, we analysed the population structure of a total of 250 Finnish C. jejuni isolates from bovines, poultry meat and humans collected in 2003 using a combination of Bayesian clustering (BAPS software) and phylogenetic analysis. RESULTS: In the first phase we analysed sequence types (STs) of 102 Finnish bovine C. jejuni isolates by MLST and found a high diversity totalling 50 STs of which nearly half were novel. In the second phase we included MLST data from domestic human isolates as well as poultry C. jejuni isolates from the same time period. Between the human and bovine isolates we found an overlap of 72.2%, while 69% of the human isolates were overlapping with the chicken isolates. In the BAPS analysis 44.3% of the human isolates were found in bovine-associated BAPS clusters and 45.4% of the human isolates were found in the poultry-associated BAPS cluster. BAPS reflected the phylogeny of our data very well. CONCLUSIONS: These findings suggest that bovines and poultry were equally important as reservoirs for human C. jejuni infections in Finland in 2003. Our results differ from those obtained in other countries where poultry has been identified as the most important source for human infections. The low prevalence of C. jejuni in poultry flocks in Finland could explain the lower attribution of human infection to poultry. Of the human isolates 10.3% were found in clusters not associated with any host which warrants further investigation, with particular focus on waterborne transmission routes and companion animals. BioMed Central 2010-07-26 /pmc/articles/PMC2914712/ /pubmed/20659332 http://dx.doi.org/10.1186/1471-2180-10-200 Text en Copyright ©2010 de Haan et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
de Haan, Caroline PA
Kivistö, Rauni I
Hakkinen, Marjaana
Corander, Jukka
Hänninen, Marja-Liisa
Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections
title Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections
title_full Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections
title_fullStr Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections
title_full_unstemmed Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections
title_short Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections
title_sort multilocus sequence types of finnish bovine campylobacter jejuni isolates and their attribution to human infections
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2914712/
https://www.ncbi.nlm.nih.gov/pubmed/20659332
http://dx.doi.org/10.1186/1471-2180-10-200
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