Cargando…

Unique Functionality of 22 nt miRNAs in Triggering RDR6-Dependent siRNA Biogenesis from Target Transcripts in Arabidopsis

RNA interference pathways may involve amplification of secondary siRNAs by RNA-dependent RNA polymerases. In plants, RDR6-dependent secondary siRNAs arise from transcripts targeted by some microRNA (miRNA). Here, Arabidopsis thaliana secondary siRNA from mRNA, and trans-acting siRNA, are shown to be...

Descripción completa

Detalles Bibliográficos
Autores principales:	Cuperus, Josh T., Carbonell, Alberto, Fahlgren, Noah, Garcia-Ruiz, Hernan, Burke, Russell T., Takeda, Atsushi, Sullivan, Christopher M., Gilbert, Sunny D., Montgomery, Taiowa A., Carrington, James C.
Formato:	Texto
Lenguaje:	English
Publicado:	2010
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2916640/ https://www.ncbi.nlm.nih.gov/pubmed/20562854 http://dx.doi.org/10.1038/nsmb.1866

Ejemplares similares

The ERI-6/7 Helicase Acts at the First Stage of an siRNA Amplification Pathway That Targets Recent Gene Duplications
por: Fischer, Sylvia E. J., et al.
Publicado: (2011)

Sequencing of RDR6-dependent double-stranded RNAs reveals novel features of plant siRNA biogenesis
por: Rajeswaran, Rajendran, et al.
Publicado: (2012)

RDR2 Partially Antagonizes the Production of RDR6-Dependent siRNA in Sense Transgene-Mediated PTGS
por: Jauvion, Vincent, et al.
Publicado: (2012)

Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidopsis
por: Blevins, Todd, et al.
Publicado: (2015)

Detection of Pol IV/RDR2-dependent transcripts at the genomic scale in Arabidopsis reveals features and regulation of siRNA biogenesis
por: Li, Shaofang, et al.
Publicado: (2015)

High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
por: Shi, Zhen, et al.
Publicado: (2013)

Genome-Wide Profiling and Analysis of Arabidopsis siRNAs
por: Kasschau, Kristin D, et al.
Publicado: (2007)

P-SAMS: a web site for plant artificial microRNA and synthetic trans-acting small interfering RNA design
por: Fahlgren, Noah, et al.
Publicado: (2016)

Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric miRNA precursors
por: Carbonell, Alberto, et al.
Publicado: (2015)

The CaMV transactivator/viroplasmin interferes with RDR6-dependent trans-acting and secondary siRNA pathways in Arabidopsis
por: Shivaprasad, Padubidri V., et al.
Publicado: (2008)

RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA
por: Rajeswaran, Rajendran, et al.
Publicado: (2012)

Loss of RNA–Dependent RNA Polymerase 2 (RDR2) Function Causes Widespread and Unexpected Changes in the Expression of Transposons, Genes, and 24-nt Small RNAs
por: Jia, Yi, et al.
Publicado: (2009)

Synergy between the anthocyanin and RDR6/SGS3/DCL4 siRNA pathways expose hidden features of Arabidopsis carbon metabolism
por: Jiang, Nan, et al.
Publicado: (2020)

Phytophthora Have Distinct Endogenous Small RNA Populations That Include Short Interfering and microRNAs
por: Fahlgren, Noah, et al.
Publicado: (2013)

Resetting of the 24-nt siRNA landscape in rice zygotes
por: Li, Chenxin, et al.
Publicado: (2022)

The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
por: Castellano, Leandro, et al.
Publicado: (2015)

Primer-Dependent and Primer-Independent Initiation of Double Stranded RNA Synthesis by Purified Arabidopsis RNA-Dependent RNA Polymerases RDR2 and RDR6
por: Devert, Anthony, et al.
Publicado: (2015)

Genome-wide redistribution of 24-nt siRNAs in rice gametes
por: Li, Chenxin, et al.
Publicado: (2020)

Author Correction: Synergy between the anthocyanin and RDR6/SGS3/DCL4 siRNA pathways expose hidden features of Arabidopsis carbon metabolism
por: Jiang, Nan, et al.
Publicado: (2020)

A DCL3 dicing code within Pol IV-RDR2 transcripts diversifies the siRNA pool guiding RNA-directed DNA methylation
por: Loffer, Andrew, et al.
Publicado: (2022)

ALG-5 is a miRNA-associated Argonaute required for proper developmental timing in the Caenorhabditis elegans germline
por: Brown, Kristen C., et al.
Publicado: (2017)

Roles and Programming of Arabidopsis ARGONAUTE Proteins during Turnip Mosaic Virus Infection
por: Garcia-Ruiz, Hernan, et al.
Publicado: (2015)

Biogenesis and Biological Activity of Secondary siRNAs in Plants
por: Vazquez, Franck, et al.
Publicado: (2013)

Evolution of the Rdr1 TNL-cluster in roses and other Rosaceous species
por: Terefe-Ayana, Diro, et al.
Publicado: (2012)

High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes
por: Fahlgren, Noah, et al.
Publicado: (2007)

PIWI Associated siRNAs and piRNAs Specifically Require the Caenorhabditis elegans HEN1 Ortholog henn-1
por: Montgomery, Taiowa A., et al.
Publicado: (2012)

Widespread roles for piRNAs and WAGO-class siRNAs in shaping the germline transcriptome of Caenorhabditis elegans
por: Reed, Kailee J, et al.
Publicado: (2020)

Discovery of the major 15–30 nt mammalian small RNAs, their biogenesis and function
por: Lai, Hejin, et al.
Publicado: (2023)

MicroRNA–Directed siRNA Biogenesis in Caenorhabditis elegans
por: Corrêa, Régis L., et al.
Publicado: (2010)

Biogenesis of phased siRNAs on membrane-bound polysomes in Arabidopsis
por: Li, Shengben, et al.
Publicado: (2016)

Involvement of RDR6 in short-range intercellular RNA silencing in Nicotiana benthamiana
por: Qin, Cheng, et al.
Publicado: (2012)

Mining Disease-Resistance Genes in Roses: Functional and Molecular Characterization of the Rdr1 Locus
por: Terefe-Ayana, Diro, et al.
Publicado: (2011)

RDR6 Is Essential for Double-Strand Break Formation during Male Meiosis in Rice
por: Zhan, Junpeng
Publicado: (2020)

Genome-wide identification and characterization of DCL, AGO and RDR gene families in Saccharum spontaneum
por: Cui, Dong-Li, et al.
Publicado: (2020)

Analysis of the RNA-Dependent RNA Polymerase 1 (RDR1) Gene Family in Melon
por: Leibman, Diana, et al.
Publicado: (2022)

The miRNA biogenesis in marine bivalves
por: Rosani, Umberto, et al.
Publicado: (2016)

siRNA-mediated off-target gene silencing triggered by a 7 nt complementation
por: Lin, Xiaoyu, et al.
Publicado: (2005)

Core RNA Interference Genes Involved in miRNA and Ta-siRNA Biogenesis in Hops and Their Expression Analysis after Challenging with Verticillium nonalfalfae
por: Kunej, Urban, et al.
Publicado: (2021)

Proposed mechanism for the initiation of transposable element silencing by the RDR6-directed DNA methylation pathway
por: Panda, Kaushik, et al.
Publicado: (2013)

CMV2b-AGO Interaction Is Required for the Suppression of RDR-Dependent Antiviral Silencing in Arabidopsis
por: Fang, Yuan-Yuan, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_hgs00r1qgdbk6lci1bf1f793vt