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History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study
Recent experiments have demonstrated that the timescale of adaptation of single neurons and ion channel populations to stimuli slows down as the length of stimulation increases; in fact, no upper bound on temporal timescales seems to exist in such systems. Furthermore, patch clamp experiments on sin...
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Formato: | Texto |
Lenguaje: | English |
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Frontiers Research Foundation
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2916672/ https://www.ncbi.nlm.nih.gov/pubmed/20725633 http://dx.doi.org/10.3389/fncom.2010.00003 |
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author | Soudry, Daniel Meir, Ron |
author_facet | Soudry, Daniel Meir, Ron |
author_sort | Soudry, Daniel |
collection | PubMed |
description | Recent experiments have demonstrated that the timescale of adaptation of single neurons and ion channel populations to stimuli slows down as the length of stimulation increases; in fact, no upper bound on temporal timescales seems to exist in such systems. Furthermore, patch clamp experiments on single ion channels have hinted at the existence of large, mostly unobservable, inactivation state spaces within a single ion channel. This raises the question of the relation between this multitude of inactivation states and the observed behavior. In this work we propose a minimal model for ion channel dynamics which does not assume any specific structure of the inactivation state space. The model is simple enough to render an analytical study possible. This leads to a clear and concise explanation of the experimentally observed exponential history-dependent relaxation in sodium channels in a voltage clamp setting, and shows that their recovery rate from slow inactivation must be voltage dependent. Furthermore, we predict that history-dependent relaxation cannot be created by overly sparse spiking activity. While the model was created with ion channel populations in mind, its simplicity and genericalness render it a good starting point for modeling similar effects in other systems, and for scaling up to higher levels such as single neurons which are also known to exhibit multiple time scales. |
format | Text |
id | pubmed-2916672 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-29166722010-08-19 History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study Soudry, Daniel Meir, Ron Front Comput Neurosci Neuroscience Recent experiments have demonstrated that the timescale of adaptation of single neurons and ion channel populations to stimuli slows down as the length of stimulation increases; in fact, no upper bound on temporal timescales seems to exist in such systems. Furthermore, patch clamp experiments on single ion channels have hinted at the existence of large, mostly unobservable, inactivation state spaces within a single ion channel. This raises the question of the relation between this multitude of inactivation states and the observed behavior. In this work we propose a minimal model for ion channel dynamics which does not assume any specific structure of the inactivation state space. The model is simple enough to render an analytical study possible. This leads to a clear and concise explanation of the experimentally observed exponential history-dependent relaxation in sodium channels in a voltage clamp setting, and shows that their recovery rate from slow inactivation must be voltage dependent. Furthermore, we predict that history-dependent relaxation cannot be created by overly sparse spiking activity. While the model was created with ion channel populations in mind, its simplicity and genericalness render it a good starting point for modeling similar effects in other systems, and for scaling up to higher levels such as single neurons which are also known to exhibit multiple time scales. Frontiers Research Foundation 2010-04-08 /pmc/articles/PMC2916672/ /pubmed/20725633 http://dx.doi.org/10.3389/fncom.2010.00003 Text en Copyright © 2010 Soudry and Meir. http://www.frontiersin.org/licenseagreement This is an open-access article subject to an exclusive license agreement between the authors and the Frontiers Research Foundation, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited. |
spellingShingle | Neuroscience Soudry, Daniel Meir, Ron History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study |
title | History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study |
title_full | History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study |
title_fullStr | History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study |
title_full_unstemmed | History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study |
title_short | History-Dependent Dynamics in a Generic Model of Ion Channels – An Analytic Study |
title_sort | history-dependent dynamics in a generic model of ion channels – an analytic study |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2916672/ https://www.ncbi.nlm.nih.gov/pubmed/20725633 http://dx.doi.org/10.3389/fncom.2010.00003 |
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