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Deriving enzymatic and taxonomic signatures of metagenomes from short read data
BACKGROUND: We propose a method for deriving enzymatic signatures from short read metagenomic data of unknown species. The short read data are converted to six pseudo-peptide candidates. We search for occurrences of Specific Peptides (SPs) on the latter. SPs are peptides that are indicative of enzym...
| Autores principales: | , , , |
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| Formato: | Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2010
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2922197/ https://www.ncbi.nlm.nih.gov/pubmed/20649951 http://dx.doi.org/10.1186/1471-2105-11-390 |