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A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation

Transforming growth factor-β(1) (TGF-β(1)) regulates cellular proliferation, differentiation, migration, and survival. The human TGF-β(1) transcript is inherently poorly translated, and translational activation has been documented in relation to several stimuli. In this paper, we have sought to iden...

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Autores principales: Jenkins, Robert H., Bennagi, Rasha, Martin, John, Phillips, Aled O., Redman, James E., Fraser, Donald J.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2928724/
https://www.ncbi.nlm.nih.gov/pubmed/20865036
http://dx.doi.org/10.1371/journal.pone.0012283
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author Jenkins, Robert H.
Bennagi, Rasha
Martin, John
Phillips, Aled O.
Redman, James E.
Fraser, Donald J.
author_facet Jenkins, Robert H.
Bennagi, Rasha
Martin, John
Phillips, Aled O.
Redman, James E.
Fraser, Donald J.
author_sort Jenkins, Robert H.
collection PubMed
description Transforming growth factor-β(1) (TGF-β(1)) regulates cellular proliferation, differentiation, migration, and survival. The human TGF-β(1) transcript is inherently poorly translated, and translational activation has been documented in relation to several stimuli. In this paper, we have sought to identify in cis regulatory elements within the TGF-β(1) 5′Untranslated Region (5′UTR). In silico analysis predicted formation of stable secondary structure in a G/C-rich element between nucleotides +77 to +106, and demonstrated that this element is highly conserved across species. Circular dichroism spectroscopy confirmed the presence of secondary structure in this region. The proximal 5′UTR was inhibitory to translation in reporter gene experiments, and mutation of the secondary structure motif increased translational efficiency. Translational regulation of TGF-β(1) mRNA is linked to altered binding of YB-1 protein to its 5′UTR. Immunoprecipitation-RT-qPCR demonstrated a high basal association of YB-1 with TGF-β(1) mRNA. However, mutation of the secondary structure motif did not prevent interaction of YB-1 with the 5′UTR, suggesting that YB-1 binds to this region due to its G/C-rich composition, rather than a specific, sequence-dependent, binding site. These data identify a highly conserved element within the TGF-β(1) 5′UTR that forms stable secondary structure, and is responsible for the inherent low translation efficiency of this cytokine.
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spelling pubmed-29287242010-09-23 A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation Jenkins, Robert H. Bennagi, Rasha Martin, John Phillips, Aled O. Redman, James E. Fraser, Donald J. PLoS One Research Article Transforming growth factor-β(1) (TGF-β(1)) regulates cellular proliferation, differentiation, migration, and survival. The human TGF-β(1) transcript is inherently poorly translated, and translational activation has been documented in relation to several stimuli. In this paper, we have sought to identify in cis regulatory elements within the TGF-β(1) 5′Untranslated Region (5′UTR). In silico analysis predicted formation of stable secondary structure in a G/C-rich element between nucleotides +77 to +106, and demonstrated that this element is highly conserved across species. Circular dichroism spectroscopy confirmed the presence of secondary structure in this region. The proximal 5′UTR was inhibitory to translation in reporter gene experiments, and mutation of the secondary structure motif increased translational efficiency. Translational regulation of TGF-β(1) mRNA is linked to altered binding of YB-1 protein to its 5′UTR. Immunoprecipitation-RT-qPCR demonstrated a high basal association of YB-1 with TGF-β(1) mRNA. However, mutation of the secondary structure motif did not prevent interaction of YB-1 with the 5′UTR, suggesting that YB-1 binds to this region due to its G/C-rich composition, rather than a specific, sequence-dependent, binding site. These data identify a highly conserved element within the TGF-β(1) 5′UTR that forms stable secondary structure, and is responsible for the inherent low translation efficiency of this cytokine. Public Library of Science 2010-08-26 /pmc/articles/PMC2928724/ /pubmed/20865036 http://dx.doi.org/10.1371/journal.pone.0012283 Text en Jenkins et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Jenkins, Robert H.
Bennagi, Rasha
Martin, John
Phillips, Aled O.
Redman, James E.
Fraser, Donald J.
A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation
title A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation
title_full A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation
title_fullStr A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation
title_full_unstemmed A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation
title_short A Conserved Stem Loop Motif in the 5′Untranslated Region Regulates Transforming Growth Factor-β(1) Translation
title_sort conserved stem loop motif in the 5′untranslated region regulates transforming growth factor-β(1) translation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2928724/
https://www.ncbi.nlm.nih.gov/pubmed/20865036
http://dx.doi.org/10.1371/journal.pone.0012283
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