ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

Summary: The first open source software suite for experimentalists and curators that (i) assists in the annotation and local management of experimental metadata from high-throughput studies employing one or a combination of omics and other technologies; (ii) empowers users to uptake community-define...

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Autores principales: Rocca-Serra, Philippe, Brandizi, Marco, Maguire, Eamonn, Sklyar, Nataliya, Taylor, Chris, Begley, Kimberly, Field, Dawn, Harris, Stephen, Hide, Winston, Hofmann, Oliver, Neumann, Steffen, Sterk, Peter, Tong, Weida, Sansone, Susanna-Assunta
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Applications Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935443/
https://www.ncbi.nlm.nih.gov/pubmed/20679334
http://dx.doi.org/10.1093/bioinformatics/btq415
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author Rocca-Serra, Philippe
Brandizi, Marco
Maguire, Eamonn
Sklyar, Nataliya
Taylor, Chris
Begley, Kimberly
Field, Dawn
Harris, Stephen
Hide, Winston
Hofmann, Oliver
Neumann, Steffen
Sterk, Peter
Tong, Weida
Sansone, Susanna-Assunta
author_facet Rocca-Serra, Philippe
Brandizi, Marco
Maguire, Eamonn
Sklyar, Nataliya
Taylor, Chris
Begley, Kimberly
Field, Dawn
Harris, Stephen
Hide, Winston
Hofmann, Oliver
Neumann, Steffen
Sterk, Peter
Tong, Weida
Sansone, Susanna-Assunta
author_sort Rocca-Serra, Philippe
collection PubMed
description Summary: The first open source software suite for experimentalists and curators that (i) assists in the annotation and local management of experimental metadata from high-throughput studies employing one or a combination of omics and other technologies; (ii) empowers users to uptake community-defined checklists and ontologies; and (iii) facilitates submission to international public repositories. Availability and Implementation: Software, documentation, case studies and implementations at http://www.isa-tools.org Contact: isatools@googlegroups.com
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spelling pubmed-29354432010-09-08 ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level Rocca-Serra, Philippe Brandizi, Marco Maguire, Eamonn Sklyar, Nataliya Taylor, Chris Begley, Kimberly Field, Dawn Harris, Stephen Hide, Winston Hofmann, Oliver Neumann, Steffen Sterk, Peter Tong, Weida Sansone, Susanna-Assunta Bioinformatics Applications Note Summary: The first open source software suite for experimentalists and curators that (i) assists in the annotation and local management of experimental metadata from high-throughput studies employing one or a combination of omics and other technologies; (ii) empowers users to uptake community-defined checklists and ontologies; and (iii) facilitates submission to international public repositories. Availability and Implementation: Software, documentation, case studies and implementations at http://www.isa-tools.org Contact: isatools@googlegroups.com Oxford University Press 2010-09-15 2010-08-02 /pmc/articles/PMC2935443/ /pubmed/20679334 http://dx.doi.org/10.1093/bioinformatics/btq415 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.0/uk/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Applications Note
Rocca-Serra, Philippe
Brandizi, Marco
Maguire, Eamonn
Sklyar, Nataliya
Taylor, Chris
Begley, Kimberly
Field, Dawn
Harris, Stephen
Hide, Winston
Hofmann, Oliver
Neumann, Steffen
Sterk, Peter
Tong, Weida
Sansone, Susanna-Assunta
ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
title ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
title_full ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
title_fullStr ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
title_full_unstemmed ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
title_short ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
title_sort isa software suite: supporting standards-compliant experimental annotation and enabling curation at the community level
topic Applications Note
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2935443/
https://www.ncbi.nlm.nih.gov/pubmed/20679334
http://dx.doi.org/10.1093/bioinformatics/btq415
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