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Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow

Bitter taste perception likely evolved as a protective mechanism against the ingestion of harmful compounds in food. The evolution of the taste receptor type 2 (TAS2R) gene family, which encodes the chemoreceptors that are directly responsible for the detection of bitter compounds, has therefore bee...

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Autores principales: Davis, Jamie K., Lowman, Josh J., Thomas, Pamela J., ten Hallers, Boudewijn F. H., Koriabine, Maxim, Huynh, Lynn Y., Maney, Donna L., de Jong, Pieter J., Martin, Christa L., Thomas, James W.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2942037/
https://www.ncbi.nlm.nih.gov/pubmed/20624740
http://dx.doi.org/10.1093/gbe/evq027
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author Davis, Jamie K.
Lowman, Josh J.
Thomas, Pamela J.
ten Hallers, Boudewijn F. H.
Koriabine, Maxim
Huynh, Lynn Y.
Maney, Donna L.
de Jong, Pieter J.
Martin, Christa L.
Thomas, James W.
author_facet Davis, Jamie K.
Lowman, Josh J.
Thomas, Pamela J.
ten Hallers, Boudewijn F. H.
Koriabine, Maxim
Huynh, Lynn Y.
Maney, Donna L.
de Jong, Pieter J.
Martin, Christa L.
Thomas, James W.
author_sort Davis, Jamie K.
collection PubMed
description Bitter taste perception likely evolved as a protective mechanism against the ingestion of harmful compounds in food. The evolution of the taste receptor type 2 (TAS2R) gene family, which encodes the chemoreceptors that are directly responsible for the detection of bitter compounds, has therefore been of considerable interest. Though TAS2R repertoires have been characterized for a number of species, to date the complement of TAS2Rs from just one bird, the chicken, which had a notably small number of TAS2Rs, has been established. Here, we used targeted mapping and genomic sequencing in the white-throated sparrow (Zonotrichia albicollis) and sample sequencing in other closely related birds to reconstruct the history of a TAS2R gene cluster physically linked to the break points of an evolutionary chromosomal rearrangement. In the white-throated sparrow, this TAS2R cluster encodes up to 18 functional bitter taste receptors and likely underwent a large expansion that predates and/or coincides with the radiation of the Emberizinae subfamily into the New World. In addition to signatures of gene birth-and-death evolution within this cluster, estimates of Ka/Ks for the songbird TAS2Rs were similar to those previously observed in mammals, including humans. Finally, comparison of the complete genomic sequence of the cluster from two common haplotypes in the white-throated sparrow revealed a number of nonsynonymous variants and differences in functional gene content within this species. These results suggest that interspecies and intraspecies genetic variability does exist in avian TAS2Rs and that these differences could contribute to variation in bitter taste perception in birds.
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spelling pubmed-29420372010-09-20 Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow Davis, Jamie K. Lowman, Josh J. Thomas, Pamela J. ten Hallers, Boudewijn F. H. Koriabine, Maxim Huynh, Lynn Y. Maney, Donna L. de Jong, Pieter J. Martin, Christa L. Thomas, James W. Genome Biol Evol Research Articles Bitter taste perception likely evolved as a protective mechanism against the ingestion of harmful compounds in food. The evolution of the taste receptor type 2 (TAS2R) gene family, which encodes the chemoreceptors that are directly responsible for the detection of bitter compounds, has therefore been of considerable interest. Though TAS2R repertoires have been characterized for a number of species, to date the complement of TAS2Rs from just one bird, the chicken, which had a notably small number of TAS2Rs, has been established. Here, we used targeted mapping and genomic sequencing in the white-throated sparrow (Zonotrichia albicollis) and sample sequencing in other closely related birds to reconstruct the history of a TAS2R gene cluster physically linked to the break points of an evolutionary chromosomal rearrangement. In the white-throated sparrow, this TAS2R cluster encodes up to 18 functional bitter taste receptors and likely underwent a large expansion that predates and/or coincides with the radiation of the Emberizinae subfamily into the New World. In addition to signatures of gene birth-and-death evolution within this cluster, estimates of Ka/Ks for the songbird TAS2Rs were similar to those previously observed in mammals, including humans. Finally, comparison of the complete genomic sequence of the cluster from two common haplotypes in the white-throated sparrow revealed a number of nonsynonymous variants and differences in functional gene content within this species. These results suggest that interspecies and intraspecies genetic variability does exist in avian TAS2Rs and that these differences could contribute to variation in bitter taste perception in birds. Oxford University Press 2010 2010-05-21 /pmc/articles/PMC2942037/ /pubmed/20624740 http://dx.doi.org/10.1093/gbe/evq027 Text en © The Author(s) 2010. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Davis, Jamie K.
Lowman, Josh J.
Thomas, Pamela J.
ten Hallers, Boudewijn F. H.
Koriabine, Maxim
Huynh, Lynn Y.
Maney, Donna L.
de Jong, Pieter J.
Martin, Christa L.
Thomas, James W.
Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow
title Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow
title_full Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow
title_fullStr Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow
title_full_unstemmed Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow
title_short Evolution of a Bitter Taste Receptor Gene Cluster in a New World Sparrow
title_sort evolution of a bitter taste receptor gene cluster in a new world sparrow
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2942037/
https://www.ncbi.nlm.nih.gov/pubmed/20624740
http://dx.doi.org/10.1093/gbe/evq027
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