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Insights into the Evolution and Emergence of a Novel Infectious Disease

Many zoonotic, novel infectious diseases in humans appear as sporadic infections with spatially and temporally restricted outbreaks, as seen with influenza A(H5N1). Adaptation is often a key factor for successfully establishing sustained human-to-human transmission. Here we use simple mathematical m...

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Autores principales: Kubiak, Ruben J., Arinaminpathy, Nimalan, McLean, Angela R.
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2947978/
https://www.ncbi.nlm.nih.gov/pubmed/20941384
http://dx.doi.org/10.1371/journal.pcbi.1000947
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author Kubiak, Ruben J.
Arinaminpathy, Nimalan
McLean, Angela R.
author_facet Kubiak, Ruben J.
Arinaminpathy, Nimalan
McLean, Angela R.
author_sort Kubiak, Ruben J.
collection PubMed
description Many zoonotic, novel infectious diseases in humans appear as sporadic infections with spatially and temporally restricted outbreaks, as seen with influenza A(H5N1). Adaptation is often a key factor for successfully establishing sustained human-to-human transmission. Here we use simple mathematical models to describe different adaptation scenarios with particular reference to spatial heterogeneity within the human population. We present analytical expressions for the probability of emergence per introduction, as well as the waiting time to a successful emergence event. Furthermore, we derive general analytical results for the statistical properties of emergence events, including the probability distribution of outbreak sizes. We compare our analytical results with a stochastic model, which has previously been studied computationally. Our results suggest that, for typical connection strengths between communities, spatial heterogeneity has only a weak effect on outbreak size distributions, and on the risk of emergence per introduction. For example, if [Image: see text] or larger, any village connected to a large city by just ten commuters a day is, effectively, just a part of the city when considering the chances of emergence and the outbreak size distribution. We present empirical data on commuting patterns and show that the vast majority of communities for which such data are available are at least this well interconnected. For plausible parameter ranges, the effects of spatial heterogeneity are likely to be dominated by the evolutionary biology of host adaptation. We conclude by discussing implications for surveillance and control of emerging infections.
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spelling pubmed-29479782010-10-12 Insights into the Evolution and Emergence of a Novel Infectious Disease Kubiak, Ruben J. Arinaminpathy, Nimalan McLean, Angela R. PLoS Comput Biol Research Article Many zoonotic, novel infectious diseases in humans appear as sporadic infections with spatially and temporally restricted outbreaks, as seen with influenza A(H5N1). Adaptation is often a key factor for successfully establishing sustained human-to-human transmission. Here we use simple mathematical models to describe different adaptation scenarios with particular reference to spatial heterogeneity within the human population. We present analytical expressions for the probability of emergence per introduction, as well as the waiting time to a successful emergence event. Furthermore, we derive general analytical results for the statistical properties of emergence events, including the probability distribution of outbreak sizes. We compare our analytical results with a stochastic model, which has previously been studied computationally. Our results suggest that, for typical connection strengths between communities, spatial heterogeneity has only a weak effect on outbreak size distributions, and on the risk of emergence per introduction. For example, if [Image: see text] or larger, any village connected to a large city by just ten commuters a day is, effectively, just a part of the city when considering the chances of emergence and the outbreak size distribution. We present empirical data on commuting patterns and show that the vast majority of communities for which such data are available are at least this well interconnected. For plausible parameter ranges, the effects of spatial heterogeneity are likely to be dominated by the evolutionary biology of host adaptation. We conclude by discussing implications for surveillance and control of emerging infections. Public Library of Science 2010-09-30 /pmc/articles/PMC2947978/ /pubmed/20941384 http://dx.doi.org/10.1371/journal.pcbi.1000947 Text en Kubiak et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Kubiak, Ruben J.
Arinaminpathy, Nimalan
McLean, Angela R.
Insights into the Evolution and Emergence of a Novel Infectious Disease
title Insights into the Evolution and Emergence of a Novel Infectious Disease
title_full Insights into the Evolution and Emergence of a Novel Infectious Disease
title_fullStr Insights into the Evolution and Emergence of a Novel Infectious Disease
title_full_unstemmed Insights into the Evolution and Emergence of a Novel Infectious Disease
title_short Insights into the Evolution and Emergence of a Novel Infectious Disease
title_sort insights into the evolution and emergence of a novel infectious disease
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2947978/
https://www.ncbi.nlm.nih.gov/pubmed/20941384
http://dx.doi.org/10.1371/journal.pcbi.1000947
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