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Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification

Leprosy is an infectious disease caused by Mycobacterium leprae. M. leprae has undergone a major reductive evolution leaving a minimal set of functional genes for survival. It remains non­cultivable. As M. leprae develops resistance against most of the drugs, novel drug targets are required in order...

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Detalles Bibliográficos
Autores principales: Shanmugam, Anusuya, Natarajan, Jeyakumar
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951640/
https://www.ncbi.nlm.nih.gov/pubmed/20975887
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author Shanmugam, Anusuya
Natarajan, Jeyakumar
author_facet Shanmugam, Anusuya
Natarajan, Jeyakumar
author_sort Shanmugam, Anusuya
collection PubMed
description Leprosy is an infectious disease caused by Mycobacterium leprae. M. leprae has undergone a major reductive evolution leaving a minimal set of functional genes for survival. It remains non­cultivable. As M. leprae develops resistance against most of the drugs, novel drug targets are required in order to design new drugs. As most of the essential genes mediate several biosynthetic and metabolic pathways, the pathway predictions can predict essential genes. We used comparative genome analysis of metabolic enzymes in M. leprae and H. sapiens using KEGG pathway database and identified 179 non­homologues enzymes. On further comparison of these 179 non­homologous enzymes to the list of minimal set of 48 essential genes required for cell­wall biosynthesis of M. leprae reveals eight common enzymes. Interestingly, six of these eight common enzymes map to that of peptidoglycan biosynthesis and they all belong to Mur enzymes. The machinery for peptidoglycan biosynthesis is a rich source of crucial targets for antibacterial chemotherapy and thus targeting these enzymes is a step towards facilitating the search for new antibiotics.
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spelling pubmed-29516402010-10-25 Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification Shanmugam, Anusuya Natarajan, Jeyakumar Bioinformation Hypothesis Leprosy is an infectious disease caused by Mycobacterium leprae. M. leprae has undergone a major reductive evolution leaving a minimal set of functional genes for survival. It remains non­cultivable. As M. leprae develops resistance against most of the drugs, novel drug targets are required in order to design new drugs. As most of the essential genes mediate several biosynthetic and metabolic pathways, the pathway predictions can predict essential genes. We used comparative genome analysis of metabolic enzymes in M. leprae and H. sapiens using KEGG pathway database and identified 179 non­homologues enzymes. On further comparison of these 179 non­homologous enzymes to the list of minimal set of 48 essential genes required for cell­wall biosynthesis of M. leprae reveals eight common enzymes. Interestingly, six of these eight common enzymes map to that of peptidoglycan biosynthesis and they all belong to Mur enzymes. The machinery for peptidoglycan biosynthesis is a rich source of crucial targets for antibacterial chemotherapy and thus targeting these enzymes is a step towards facilitating the search for new antibiotics. Biomedical Informatics Publishing Group 2010-03-31 /pmc/articles/PMC2951640/ /pubmed/20975887 Text en © 2010 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Hypothesis
Shanmugam, Anusuya
Natarajan, Jeyakumar
Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
title Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
title_full Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
title_fullStr Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
title_full_unstemmed Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
title_short Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
title_sort computational genome analyses of metabolic enzymes in mycobacterium leprae for drug target identification
topic Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951640/
https://www.ncbi.nlm.nih.gov/pubmed/20975887
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