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Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification
Leprosy is an infectious disease caused by Mycobacterium leprae. M. leprae has undergone a major reductive evolution leaving a minimal set of functional genes for survival. It remains noncultivable. As M. leprae develops resistance against most of the drugs, novel drug targets are required in order...
Autores principales: | , |
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Formato: | Texto |
Lenguaje: | English |
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Biomedical Informatics Publishing Group
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951640/ https://www.ncbi.nlm.nih.gov/pubmed/20975887 |
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author | Shanmugam, Anusuya Natarajan, Jeyakumar |
author_facet | Shanmugam, Anusuya Natarajan, Jeyakumar |
author_sort | Shanmugam, Anusuya |
collection | PubMed |
description | Leprosy is an infectious disease caused by Mycobacterium leprae. M. leprae has undergone a major reductive evolution leaving a minimal set of functional genes for survival. It remains noncultivable. As M. leprae develops resistance against most of the drugs, novel drug targets are required in order to design new drugs. As most of the essential genes mediate several biosynthetic and metabolic pathways, the pathway predictions can predict essential genes. We used comparative genome analysis of metabolic enzymes in M. leprae and H. sapiens using KEGG pathway database and identified 179 nonhomologues enzymes. On further comparison of these 179 nonhomologous enzymes to the list of minimal set of 48 essential genes required for cellwall biosynthesis of M. leprae reveals eight common enzymes. Interestingly, six of these eight common enzymes map to that of peptidoglycan biosynthesis and they all belong to Mur enzymes. The machinery for peptidoglycan biosynthesis is a rich source of crucial targets for antibacterial chemotherapy and thus targeting these enzymes is a step towards facilitating the search for new antibiotics. |
format | Text |
id | pubmed-2951640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Biomedical Informatics Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-29516402010-10-25 Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification Shanmugam, Anusuya Natarajan, Jeyakumar Bioinformation Hypothesis Leprosy is an infectious disease caused by Mycobacterium leprae. M. leprae has undergone a major reductive evolution leaving a minimal set of functional genes for survival. It remains noncultivable. As M. leprae develops resistance against most of the drugs, novel drug targets are required in order to design new drugs. As most of the essential genes mediate several biosynthetic and metabolic pathways, the pathway predictions can predict essential genes. We used comparative genome analysis of metabolic enzymes in M. leprae and H. sapiens using KEGG pathway database and identified 179 nonhomologues enzymes. On further comparison of these 179 nonhomologous enzymes to the list of minimal set of 48 essential genes required for cellwall biosynthesis of M. leprae reveals eight common enzymes. Interestingly, six of these eight common enzymes map to that of peptidoglycan biosynthesis and they all belong to Mur enzymes. The machinery for peptidoglycan biosynthesis is a rich source of crucial targets for antibacterial chemotherapy and thus targeting these enzymes is a step towards facilitating the search for new antibiotics. Biomedical Informatics Publishing Group 2010-03-31 /pmc/articles/PMC2951640/ /pubmed/20975887 Text en © 2010 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited. |
spellingShingle | Hypothesis Shanmugam, Anusuya Natarajan, Jeyakumar Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification |
title | Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification |
title_full | Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification |
title_fullStr | Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification |
title_full_unstemmed | Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification |
title_short | Computational genome analyses of metabolic enzymes in Mycobacterium leprae for drug target identification |
title_sort | computational genome analyses of metabolic enzymes in mycobacterium leprae for drug target identification |
topic | Hypothesis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951640/ https://www.ncbi.nlm.nih.gov/pubmed/20975887 |
work_keys_str_mv | AT shanmugamanusuya computationalgenomeanalysesofmetabolicenzymesinmycobacteriumlepraefordrugtargetidentification AT natarajanjeyakumar computationalgenomeanalysesofmetabolicenzymesinmycobacteriumlepraefordrugtargetidentification |