The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations

Quality control of probe sequences is a major concern in microarray technology. The presence of poor quality probes has a negative impact on the microarray data analysis process. The Microarray Manual Curation Tool (MMCT) is a web server application that provides computational and visual means to in...

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Detalles Bibliográficos
Autores principales: Tulpan, Dan, Belliveau, Luc, Léger, Serge
Formato: Texto
Lenguaje:English
Publicado: Biomedical Informatics Publishing Group 2010
Materias:
Web Server
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951669/
https://www.ncbi.nlm.nih.gov/pubmed/20975897
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author Tulpan, Dan
Belliveau, Luc
Léger, Serge
author_facet Tulpan, Dan
Belliveau, Luc
Léger, Serge
author_sort Tulpan, Dan
collection PubMed
description Quality control of probe sequences is a major concern in microarray technology. The presence of poor quality probes has a negative impact on the microarray data analysis process. The Microarray Manual Curation Tool (MMCT) is a web server application that provides computational and visual means to investigate the quality of individual probes for oligo microarrays. The MMCT quality metrics assess the free energy of hybridization and the secondary structure of duplexes formed by selected targets and probes, which are specific to various microarray platforms. AVAILABILITY: http://www.nrcbioinformatics.ca/mmct
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spelling pubmed-29516692010-10-25 The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations Tulpan, Dan Belliveau, Luc Léger, Serge Bioinformation Web Server Quality control of probe sequences is a major concern in microarray technology. The presence of poor quality probes has a negative impact on the microarray data analysis process. The Microarray Manual Curation Tool (MMCT) is a web server application that provides computational and visual means to investigate the quality of individual probes for oligo microarrays. The MMCT quality metrics assess the free energy of hybridization and the secondary structure of duplexes formed by selected targets and probes, which are specific to various microarray platforms. AVAILABILITY: http://www.nrcbioinformatics.ca/mmct Biomedical Informatics Publishing Group 2010-02-28 /pmc/articles/PMC2951669/ /pubmed/20975897 Text en © 2010 Biomedical Informatics Publishing Group This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
spellingShingle Web Server
Tulpan, Dan
Belliveau, Luc
Léger, Serge
The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations
title The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations
title_full The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations
title_fullStr The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations
title_full_unstemmed The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations
title_short The microarray manual curation tool (MMCT): A Web server for microarray probe evaluations
title_sort microarray manual curation tool (mmct): a web server for microarray probe evaluations
topic Web Server
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951669/
https://www.ncbi.nlm.nih.gov/pubmed/20975897
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