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Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method

Bioluminescence tomography (BLT) is a promising tool for studying physiological and pathological processes at cellular and molecular levels. In most clinical or preclinical practices, fine discretization is needed for recovering sources with acceptable resolution when solving BLT with finite element...

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Detalles Bibliográficos
Autores principales: He, Xiaowei, Hou, Yanbin, Chen, Duofang, Jiang, Yuchuan, Shen, Man, Liu, Junting, Zhang, Qitan, Tian, Jie
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2952815/
https://www.ncbi.nlm.nih.gov/pubmed/20976306
http://dx.doi.org/10.1155/2011/203537
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author He, Xiaowei
Hou, Yanbin
Chen, Duofang
Jiang, Yuchuan
Shen, Man
Liu, Junting
Zhang, Qitan
Tian, Jie
author_facet He, Xiaowei
Hou, Yanbin
Chen, Duofang
Jiang, Yuchuan
Shen, Man
Liu, Junting
Zhang, Qitan
Tian, Jie
author_sort He, Xiaowei
collection PubMed
description Bioluminescence tomography (BLT) is a promising tool for studying physiological and pathological processes at cellular and molecular levels. In most clinical or preclinical practices, fine discretization is needed for recovering sources with acceptable resolution when solving BLT with finite element method (FEM). Nevertheless, uniformly fine meshes would cause large dataset and overfine meshes might aggravate the ill-posedness of BLT. Additionally, accurately quantitative information of density and power has not been simultaneously obtained so far. In this paper, we present a novel multilevel sparse reconstruction method based on adaptive FEM framework. In this method, permissible source region gradually reduces with adaptive local mesh refinement. By using sparse reconstruction with l (1) regularization on multilevel adaptive meshes, simultaneous recovery of density and power as well as accurate source location can be achieved. Experimental results for heterogeneous phantom and mouse atlas model demonstrate its effectiveness and potentiality in the application of quantitative BLT.
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spelling pubmed-29528152010-10-25 Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method He, Xiaowei Hou, Yanbin Chen, Duofang Jiang, Yuchuan Shen, Man Liu, Junting Zhang, Qitan Tian, Jie Int J Biomed Imaging Research Article Bioluminescence tomography (BLT) is a promising tool for studying physiological and pathological processes at cellular and molecular levels. In most clinical or preclinical practices, fine discretization is needed for recovering sources with acceptable resolution when solving BLT with finite element method (FEM). Nevertheless, uniformly fine meshes would cause large dataset and overfine meshes might aggravate the ill-posedness of BLT. Additionally, accurately quantitative information of density and power has not been simultaneously obtained so far. In this paper, we present a novel multilevel sparse reconstruction method based on adaptive FEM framework. In this method, permissible source region gradually reduces with adaptive local mesh refinement. By using sparse reconstruction with l (1) regularization on multilevel adaptive meshes, simultaneous recovery of density and power as well as accurate source location can be achieved. Experimental results for heterogeneous phantom and mouse atlas model demonstrate its effectiveness and potentiality in the application of quantitative BLT. Hindawi Publishing Corporation 2011 2010-10-04 /pmc/articles/PMC2952815/ /pubmed/20976306 http://dx.doi.org/10.1155/2011/203537 Text en Copyright © 2011 Xiaowei He et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
He, Xiaowei
Hou, Yanbin
Chen, Duofang
Jiang, Yuchuan
Shen, Man
Liu, Junting
Zhang, Qitan
Tian, Jie
Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method
title Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method
title_full Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method
title_fullStr Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method
title_full_unstemmed Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method
title_short Sparse Regularization-Based Reconstruction for Bioluminescence Tomography Using a Multilevel Adaptive Finite Element Method
title_sort sparse regularization-based reconstruction for bioluminescence tomography using a multilevel adaptive finite element method
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2952815/
https://www.ncbi.nlm.nih.gov/pubmed/20976306
http://dx.doi.org/10.1155/2011/203537
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