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Leaders of Neuronal Cultures in a Quorum Percolation Model
We present a theoretical framework using quorum percolation for describing the initiation of activity in a neural culture. The cultures are modeled as random graphs, whose nodes are excitatory neurons with k(in) inputs and k(out) outputs, and whose input degrees k(in) = k obey given distribution fun...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Frontiers Research Foundation
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955434/ https://www.ncbi.nlm.nih.gov/pubmed/20953239 http://dx.doi.org/10.3389/fncom.2010.00132 |
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author | Eckmann, Jean-Pierre Moses, Elisha Stetter, Olav Tlusty, Tsvi Zbinden, Cyrille |
author_facet | Eckmann, Jean-Pierre Moses, Elisha Stetter, Olav Tlusty, Tsvi Zbinden, Cyrille |
author_sort | Eckmann, Jean-Pierre |
collection | PubMed |
description | We present a theoretical framework using quorum percolation for describing the initiation of activity in a neural culture. The cultures are modeled as random graphs, whose nodes are excitatory neurons with k(in) inputs and k(out) outputs, and whose input degrees k(in) = k obey given distribution functions p(k). We examine the firing activity of the population of neurons according to their input degree (k) classes and calculate for each class its firing probability Φ(k)(t) as a function of t. The probability of a node to fire is found to be determined by its in-degree k, and the first-to-fire neurons are those that have a high k. A small minority of high-k-classes may be called “Leaders,” as they form an interconnected sub-network that consistently fires much before the rest of the culture. Once initiated, the activity spreads from the Leaders to the less connected majority of the culture. We then use the distribution of in-degree of the Leaders to study the growth rate of the number of neurons active in a burst, which was experimentally measured to be initially exponential. We find that this kind of growth rate is best described by a population that has an in-degree distribution that is a Gaussian centered around k = 75 with width σ = 31 for the majority of the neurons, but also has a power law tail with exponent −2 for 10% of the population. Neurons in the tail may have as many as k = 4,700 inputs. We explore and discuss the correspondence between the degree distribution and a dynamic neuronal threshold, showing that from the functional point of view, structure and elementary dynamics are interchangeable. We discuss possible geometric origins of this distribution, and comment on the importance of size, or of having a large number of neurons, in the culture. |
format | Text |
id | pubmed-2955434 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-29554342010-10-15 Leaders of Neuronal Cultures in a Quorum Percolation Model Eckmann, Jean-Pierre Moses, Elisha Stetter, Olav Tlusty, Tsvi Zbinden, Cyrille Front Comput Neurosci Neuroscience We present a theoretical framework using quorum percolation for describing the initiation of activity in a neural culture. The cultures are modeled as random graphs, whose nodes are excitatory neurons with k(in) inputs and k(out) outputs, and whose input degrees k(in) = k obey given distribution functions p(k). We examine the firing activity of the population of neurons according to their input degree (k) classes and calculate for each class its firing probability Φ(k)(t) as a function of t. The probability of a node to fire is found to be determined by its in-degree k, and the first-to-fire neurons are those that have a high k. A small minority of high-k-classes may be called “Leaders,” as they form an interconnected sub-network that consistently fires much before the rest of the culture. Once initiated, the activity spreads from the Leaders to the less connected majority of the culture. We then use the distribution of in-degree of the Leaders to study the growth rate of the number of neurons active in a burst, which was experimentally measured to be initially exponential. We find that this kind of growth rate is best described by a population that has an in-degree distribution that is a Gaussian centered around k = 75 with width σ = 31 for the majority of the neurons, but also has a power law tail with exponent −2 for 10% of the population. Neurons in the tail may have as many as k = 4,700 inputs. We explore and discuss the correspondence between the degree distribution and a dynamic neuronal threshold, showing that from the functional point of view, structure and elementary dynamics are interchangeable. We discuss possible geometric origins of this distribution, and comment on the importance of size, or of having a large number of neurons, in the culture. Frontiers Research Foundation 2010-09-22 /pmc/articles/PMC2955434/ /pubmed/20953239 http://dx.doi.org/10.3389/fncom.2010.00132 Text en Copyright © 2010 Eckmann, Moses, Stetter, Tlusty and Zbinden. http://www.frontiersin.org/licenseagreement This is an open-access article subject to an exclusive license agreement between the authors and the Frontiers Research Foundation, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited. |
spellingShingle | Neuroscience Eckmann, Jean-Pierre Moses, Elisha Stetter, Olav Tlusty, Tsvi Zbinden, Cyrille Leaders of Neuronal Cultures in a Quorum Percolation Model |
title | Leaders of Neuronal Cultures in a Quorum Percolation Model |
title_full | Leaders of Neuronal Cultures in a Quorum Percolation Model |
title_fullStr | Leaders of Neuronal Cultures in a Quorum Percolation Model |
title_full_unstemmed | Leaders of Neuronal Cultures in a Quorum Percolation Model |
title_short | Leaders of Neuronal Cultures in a Quorum Percolation Model |
title_sort | leaders of neuronal cultures in a quorum percolation model |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955434/ https://www.ncbi.nlm.nih.gov/pubmed/20953239 http://dx.doi.org/10.3389/fncom.2010.00132 |
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