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Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials
Phase-locked spikes in various types of neurons encode temporal information. To quantify the degree of phase-locking, the metric called vector strength (VS) has been most widely used. Since VS is derived from spike timing information, error in measurement of spike occurrence should result in errors...
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Formato: | Texto |
Lenguaje: | English |
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Frontiers Research Foundation
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955492/ https://www.ncbi.nlm.nih.gov/pubmed/20953249 http://dx.doi.org/10.3389/fnins.2010.00172 |
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author | Ashida, Go Carr, Catherine E. |
author_facet | Ashida, Go Carr, Catherine E. |
author_sort | Ashida, Go |
collection | PubMed |
description | Phase-locked spikes in various types of neurons encode temporal information. To quantify the degree of phase-locking, the metric called vector strength (VS) has been most widely used. Since VS is derived from spike timing information, error in measurement of spike occurrence should result in errors in VS calculation. In electrophysiological experiments, the timing of an action potential is detected with finite temporal precision, which is determined by the sampling frequency. In order to evaluate the effects of the sampling frequency on the measurement of VS, we derive theoretical upper and lower bounds of VS from spikes collected with finite sampling rates. We next estimate errors in VS assuming random sampling effects, and show that our theoretical calculation agrees with data from electrophysiological recordings in vivo. Our results provide a practical guide for choosing the appropriate sampling frequency in measuring VS. |
format | Text |
id | pubmed-2955492 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Frontiers Research Foundation |
record_format | MEDLINE/PubMed |
spelling | pubmed-29554922010-10-15 Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials Ashida, Go Carr, Catherine E. Front Neurosci Neuroscience Phase-locked spikes in various types of neurons encode temporal information. To quantify the degree of phase-locking, the metric called vector strength (VS) has been most widely used. Since VS is derived from spike timing information, error in measurement of spike occurrence should result in errors in VS calculation. In electrophysiological experiments, the timing of an action potential is detected with finite temporal precision, which is determined by the sampling frequency. In order to evaluate the effects of the sampling frequency on the measurement of VS, we derive theoretical upper and lower bounds of VS from spikes collected with finite sampling rates. We next estimate errors in VS assuming random sampling effects, and show that our theoretical calculation agrees with data from electrophysiological recordings in vivo. Our results provide a practical guide for choosing the appropriate sampling frequency in measuring VS. Frontiers Research Foundation 2010-09-30 /pmc/articles/PMC2955492/ /pubmed/20953249 http://dx.doi.org/10.3389/fnins.2010.00172 Text en Copyright © 2010 Ashida and Carr. http://www.frontiersin.org/licenseagreement This is an open-access article subject to an exclusive license agreement between the authors and the Frontiers Research Foundation, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are credited. |
spellingShingle | Neuroscience Ashida, Go Carr, Catherine E. Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials |
title | Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials
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title_full | Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials
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title_fullStr | Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials
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title_full_unstemmed | Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials
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title_short | Effect of Sampling Frequency on the Measurement of Phase-Locked Action Potentials
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title_sort | effect of sampling frequency on the measurement of phase-locked action potentials |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955492/ https://www.ncbi.nlm.nih.gov/pubmed/20953249 http://dx.doi.org/10.3389/fnins.2010.00172 |
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