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Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1

BACKGROUND: Bacteriophages (phages) are widespread in the environment and play a crucial role in the evolution of their bacterial hosts and the emergence of new pathogens. RESULTS: LSB-1, a reference coliphage strain, was classified as a member of the Podoviridae family with a cystic form (50 ± 5 nm...

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Autores principales: Chai, Yaming, Xiong, Hongyan, Ma, Xiangyu, Cheng, Liqing, Huang, Guorong, Zhang, Zhonglin Rao Lin
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955717/
https://www.ncbi.nlm.nih.gov/pubmed/20875143
http://dx.doi.org/10.1186/1743-422X-7-255
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author Chai, Yaming
Xiong, Hongyan
Ma, Xiangyu
Cheng, Liqing
Huang, Guorong
Zhang, Zhonglin Rao Lin
author_facet Chai, Yaming
Xiong, Hongyan
Ma, Xiangyu
Cheng, Liqing
Huang, Guorong
Zhang, Zhonglin Rao Lin
author_sort Chai, Yaming
collection PubMed
description BACKGROUND: Bacteriophages (phages) are widespread in the environment and play a crucial role in the evolution of their bacterial hosts and the emergence of new pathogens. RESULTS: LSB-1, a reference coliphage strain, was classified as a member of the Podoviridae family with a cystic form (50 ± 5 nm diameter) and short tail (60 ± 5 nm long). The double stranded DNA was about 30 kilobase pairs in length. We identified its host range and determined the gp17 sequences and protein structure using shotgun analysis and bioinformatics technology. CONCLUSIONS: Coliphage LSB-1 possesses a tailspike protein with endosialidase activity which is probably responsible for its specific enteroinvasive E.coli host range within the laboratory.
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spelling pubmed-29557172010-10-16 Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1 Chai, Yaming Xiong, Hongyan Ma, Xiangyu Cheng, Liqing Huang, Guorong Zhang, Zhonglin Rao Lin Virol J Research BACKGROUND: Bacteriophages (phages) are widespread in the environment and play a crucial role in the evolution of their bacterial hosts and the emergence of new pathogens. RESULTS: LSB-1, a reference coliphage strain, was classified as a member of the Podoviridae family with a cystic form (50 ± 5 nm diameter) and short tail (60 ± 5 nm long). The double stranded DNA was about 30 kilobase pairs in length. We identified its host range and determined the gp17 sequences and protein structure using shotgun analysis and bioinformatics technology. CONCLUSIONS: Coliphage LSB-1 possesses a tailspike protein with endosialidase activity which is probably responsible for its specific enteroinvasive E.coli host range within the laboratory. BioMed Central 2010-09-28 /pmc/articles/PMC2955717/ /pubmed/20875143 http://dx.doi.org/10.1186/1743-422X-7-255 Text en Copyright ©2010 Chai et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Chai, Yaming
Xiong, Hongyan
Ma, Xiangyu
Cheng, Liqing
Huang, Guorong
Zhang, Zhonglin Rao Lin
Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1
title Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1
title_full Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1
title_fullStr Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1
title_full_unstemmed Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1
title_short Molecular characterization, structural analysis and determination of host range of a novel bacteriophage LSB-1
title_sort molecular characterization, structural analysis and determination of host range of a novel bacteriophage lsb-1
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2955717/
https://www.ncbi.nlm.nih.gov/pubmed/20875143
http://dx.doi.org/10.1186/1743-422X-7-255
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