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Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks

In this paper we propose a model to describe the mechanisms by which undifferentiated cells attain gene configurations underlying cell fate determination during morphogenesis. Despite the complicated mechanisms that surely intervene in this process, it is clear that the fundamental fact is that cell...

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Autores principales: Barrio, Rafael Ángel, Hernández-Machado, Aurora, Varea, C., Romero-Arias, José Roberto, Álvarez-Buylla, Elena
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965087/
https://www.ncbi.nlm.nih.gov/pubmed/21048956
http://dx.doi.org/10.1371/journal.pone.0013523
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author Barrio, Rafael Ángel
Hernández-Machado, Aurora
Varea, C.
Romero-Arias, José Roberto
Álvarez-Buylla, Elena
author_facet Barrio, Rafael Ángel
Hernández-Machado, Aurora
Varea, C.
Romero-Arias, José Roberto
Álvarez-Buylla, Elena
author_sort Barrio, Rafael Ángel
collection PubMed
description In this paper we propose a model to describe the mechanisms by which undifferentiated cells attain gene configurations underlying cell fate determination during morphogenesis. Despite the complicated mechanisms that surely intervene in this process, it is clear that the fundamental fact is that cells obtain spatial and temporal information that bias their destiny. Our main hypothesis assumes that there is at least one macroscopic field that breaks the symmetry of space at a given time. This field provides the information required for the process of cell differentiation to occur by being dynamically coupled to a signal transduction mechanism that, in turn, acts directly upon the gene regulatory network (GRN) underlying cell-fate decisions within cells. We illustrate and test our proposal with a GRN model grounded on experimental data for cell fate specification during organ formation in early Arabidopsis thaliana flower development. We show that our model is able to recover the multigene configurations characteristic of sepal, petal, stamen and carpel primordial cells arranged in concentric rings, in a similar pattern to that observed during actual floral organ determination. Such pattern is robust to alterations of the model parameters and simulated failures predict altered spatio-temporal patterns that mimic those described for several mutants. Furthermore, simulated alterations in the physical fields predict a pattern equivalent to that found in Lacandonia schismatica, the only flowering species with central stamens surrounded by carpels.
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spelling pubmed-29650872010-11-03 Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks Barrio, Rafael Ángel Hernández-Machado, Aurora Varea, C. Romero-Arias, José Roberto Álvarez-Buylla, Elena PLoS One Research Article In this paper we propose a model to describe the mechanisms by which undifferentiated cells attain gene configurations underlying cell fate determination during morphogenesis. Despite the complicated mechanisms that surely intervene in this process, it is clear that the fundamental fact is that cells obtain spatial and temporal information that bias their destiny. Our main hypothesis assumes that there is at least one macroscopic field that breaks the symmetry of space at a given time. This field provides the information required for the process of cell differentiation to occur by being dynamically coupled to a signal transduction mechanism that, in turn, acts directly upon the gene regulatory network (GRN) underlying cell-fate decisions within cells. We illustrate and test our proposal with a GRN model grounded on experimental data for cell fate specification during organ formation in early Arabidopsis thaliana flower development. We show that our model is able to recover the multigene configurations characteristic of sepal, petal, stamen and carpel primordial cells arranged in concentric rings, in a similar pattern to that observed during actual floral organ determination. Such pattern is robust to alterations of the model parameters and simulated failures predict altered spatio-temporal patterns that mimic those described for several mutants. Furthermore, simulated alterations in the physical fields predict a pattern equivalent to that found in Lacandonia schismatica, the only flowering species with central stamens surrounded by carpels. Public Library of Science 2010-10-27 /pmc/articles/PMC2965087/ /pubmed/21048956 http://dx.doi.org/10.1371/journal.pone.0013523 Text en Barrio et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Barrio, Rafael Ángel
Hernández-Machado, Aurora
Varea, C.
Romero-Arias, José Roberto
Álvarez-Buylla, Elena
Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
title Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
title_full Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
title_fullStr Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
title_full_unstemmed Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
title_short Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
title_sort flower development as an interplay between dynamical physical fields and genetic networks
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965087/
https://www.ncbi.nlm.nih.gov/pubmed/21048956
http://dx.doi.org/10.1371/journal.pone.0013523
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