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Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks
In this paper we propose a model to describe the mechanisms by which undifferentiated cells attain gene configurations underlying cell fate determination during morphogenesis. Despite the complicated mechanisms that surely intervene in this process, it is clear that the fundamental fact is that cell...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965087/ https://www.ncbi.nlm.nih.gov/pubmed/21048956 http://dx.doi.org/10.1371/journal.pone.0013523 |
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author | Barrio, Rafael Ángel Hernández-Machado, Aurora Varea, C. Romero-Arias, José Roberto Álvarez-Buylla, Elena |
author_facet | Barrio, Rafael Ángel Hernández-Machado, Aurora Varea, C. Romero-Arias, José Roberto Álvarez-Buylla, Elena |
author_sort | Barrio, Rafael Ángel |
collection | PubMed |
description | In this paper we propose a model to describe the mechanisms by which undifferentiated cells attain gene configurations underlying cell fate determination during morphogenesis. Despite the complicated mechanisms that surely intervene in this process, it is clear that the fundamental fact is that cells obtain spatial and temporal information that bias their destiny. Our main hypothesis assumes that there is at least one macroscopic field that breaks the symmetry of space at a given time. This field provides the information required for the process of cell differentiation to occur by being dynamically coupled to a signal transduction mechanism that, in turn, acts directly upon the gene regulatory network (GRN) underlying cell-fate decisions within cells. We illustrate and test our proposal with a GRN model grounded on experimental data for cell fate specification during organ formation in early Arabidopsis thaliana flower development. We show that our model is able to recover the multigene configurations characteristic of sepal, petal, stamen and carpel primordial cells arranged in concentric rings, in a similar pattern to that observed during actual floral organ determination. Such pattern is robust to alterations of the model parameters and simulated failures predict altered spatio-temporal patterns that mimic those described for several mutants. Furthermore, simulated alterations in the physical fields predict a pattern equivalent to that found in Lacandonia schismatica, the only flowering species with central stamens surrounded by carpels. |
format | Text |
id | pubmed-2965087 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-29650872010-11-03 Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks Barrio, Rafael Ángel Hernández-Machado, Aurora Varea, C. Romero-Arias, José Roberto Álvarez-Buylla, Elena PLoS One Research Article In this paper we propose a model to describe the mechanisms by which undifferentiated cells attain gene configurations underlying cell fate determination during morphogenesis. Despite the complicated mechanisms that surely intervene in this process, it is clear that the fundamental fact is that cells obtain spatial and temporal information that bias their destiny. Our main hypothesis assumes that there is at least one macroscopic field that breaks the symmetry of space at a given time. This field provides the information required for the process of cell differentiation to occur by being dynamically coupled to a signal transduction mechanism that, in turn, acts directly upon the gene regulatory network (GRN) underlying cell-fate decisions within cells. We illustrate and test our proposal with a GRN model grounded on experimental data for cell fate specification during organ formation in early Arabidopsis thaliana flower development. We show that our model is able to recover the multigene configurations characteristic of sepal, petal, stamen and carpel primordial cells arranged in concentric rings, in a similar pattern to that observed during actual floral organ determination. Such pattern is robust to alterations of the model parameters and simulated failures predict altered spatio-temporal patterns that mimic those described for several mutants. Furthermore, simulated alterations in the physical fields predict a pattern equivalent to that found in Lacandonia schismatica, the only flowering species with central stamens surrounded by carpels. Public Library of Science 2010-10-27 /pmc/articles/PMC2965087/ /pubmed/21048956 http://dx.doi.org/10.1371/journal.pone.0013523 Text en Barrio et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Barrio, Rafael Ángel Hernández-Machado, Aurora Varea, C. Romero-Arias, José Roberto Álvarez-Buylla, Elena Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks |
title | Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks |
title_full | Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks |
title_fullStr | Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks |
title_full_unstemmed | Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks |
title_short | Flower Development as an Interplay between Dynamical Physical Fields and Genetic Networks |
title_sort | flower development as an interplay between dynamical physical fields and genetic networks |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965087/ https://www.ncbi.nlm.nih.gov/pubmed/21048956 http://dx.doi.org/10.1371/journal.pone.0013523 |
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