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Genome-wide association analysis identifies three psoriasis susceptibility loci
To identify novel psoriasis susceptibility loci, we carried out a meta-analysis of two recent genome-wide association studies 1,2, yielding a discovery sample of 1,831 cases and 2,546 controls. 102 of the most promising loci in the discovery analysis were followed up in a three-stage replication stu...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965799/ https://www.ncbi.nlm.nih.gov/pubmed/20953189 http://dx.doi.org/10.1038/ng.693 |
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author | Stuart, Philip E. Nair, Rajan P. Ellinghaus, Eva Ding, Jun Tejasvi, Trilokraj Gudjonsson, Johann E. Li, Yun Weidinger, Stephan Eberlein, Bernadette Gieger, Christian Wichmann, H. Erich Kunz, Manfred Ike, Robert Krueger, Gerald G. Bowcock, Anne M. Mroweitz, Ulrich Lim, Henry W. Voorhees, John J. Abecasis, Goncalo R. Weichenthal, Michael Franke, Andre Rahman, Proton Gladman, Dafna D. Elder, James T. |
author_facet | Stuart, Philip E. Nair, Rajan P. Ellinghaus, Eva Ding, Jun Tejasvi, Trilokraj Gudjonsson, Johann E. Li, Yun Weidinger, Stephan Eberlein, Bernadette Gieger, Christian Wichmann, H. Erich Kunz, Manfred Ike, Robert Krueger, Gerald G. Bowcock, Anne M. Mroweitz, Ulrich Lim, Henry W. Voorhees, John J. Abecasis, Goncalo R. Weichenthal, Michael Franke, Andre Rahman, Proton Gladman, Dafna D. Elder, James T. |
author_sort | Stuart, Philip E. |
collection | PubMed |
description | To identify novel psoriasis susceptibility loci, we carried out a meta-analysis of two recent genome-wide association studies 1,2, yielding a discovery sample of 1,831 cases and 2,546 controls. 102 of the most promising loci in the discovery analysis were followed up in a three-stage replication study using 4,064 cases and 4,685 controls from Michigan, Toronto, Newfoundland, and Germany. Association at a genome-wide level of significance for the combined discovery and replication samples was found for three genomic regions. One contains NOS2 (rs4795067, p = 4 × 10(−11)), another contains FBXL19 (rs10782001, p = 9 × 10(−10)), and a third contains PSMA6 and NFKBIA (rs12586317, p = 2 × 10(−8)). All three loci were also strongly associated with the subphenotypes of psoriatic arthritis and purely cutaneous psoriasis. Finally, we confirmed a recently identified3 association signal near RNF114. |
format | Text |
id | pubmed-2965799 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
record_format | MEDLINE/PubMed |
spelling | pubmed-29657992011-05-01 Genome-wide association analysis identifies three psoriasis susceptibility loci Stuart, Philip E. Nair, Rajan P. Ellinghaus, Eva Ding, Jun Tejasvi, Trilokraj Gudjonsson, Johann E. Li, Yun Weidinger, Stephan Eberlein, Bernadette Gieger, Christian Wichmann, H. Erich Kunz, Manfred Ike, Robert Krueger, Gerald G. Bowcock, Anne M. Mroweitz, Ulrich Lim, Henry W. Voorhees, John J. Abecasis, Goncalo R. Weichenthal, Michael Franke, Andre Rahman, Proton Gladman, Dafna D. Elder, James T. Nat Genet Article To identify novel psoriasis susceptibility loci, we carried out a meta-analysis of two recent genome-wide association studies 1,2, yielding a discovery sample of 1,831 cases and 2,546 controls. 102 of the most promising loci in the discovery analysis were followed up in a three-stage replication study using 4,064 cases and 4,685 controls from Michigan, Toronto, Newfoundland, and Germany. Association at a genome-wide level of significance for the combined discovery and replication samples was found for three genomic regions. One contains NOS2 (rs4795067, p = 4 × 10(−11)), another contains FBXL19 (rs10782001, p = 9 × 10(−10)), and a third contains PSMA6 and NFKBIA (rs12586317, p = 2 × 10(−8)). All three loci were also strongly associated with the subphenotypes of psoriatic arthritis and purely cutaneous psoriasis. Finally, we confirmed a recently identified3 association signal near RNF114. 2010-10-17 2010-11 /pmc/articles/PMC2965799/ /pubmed/20953189 http://dx.doi.org/10.1038/ng.693 Text en Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms |
spellingShingle | Article Stuart, Philip E. Nair, Rajan P. Ellinghaus, Eva Ding, Jun Tejasvi, Trilokraj Gudjonsson, Johann E. Li, Yun Weidinger, Stephan Eberlein, Bernadette Gieger, Christian Wichmann, H. Erich Kunz, Manfred Ike, Robert Krueger, Gerald G. Bowcock, Anne M. Mroweitz, Ulrich Lim, Henry W. Voorhees, John J. Abecasis, Goncalo R. Weichenthal, Michael Franke, Andre Rahman, Proton Gladman, Dafna D. Elder, James T. Genome-wide association analysis identifies three psoriasis susceptibility loci |
title | Genome-wide association analysis identifies three psoriasis susceptibility loci |
title_full | Genome-wide association analysis identifies three psoriasis susceptibility loci |
title_fullStr | Genome-wide association analysis identifies three psoriasis susceptibility loci |
title_full_unstemmed | Genome-wide association analysis identifies three psoriasis susceptibility loci |
title_short | Genome-wide association analysis identifies three psoriasis susceptibility loci |
title_sort | genome-wide association analysis identifies three psoriasis susceptibility loci |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2965799/ https://www.ncbi.nlm.nih.gov/pubmed/20953189 http://dx.doi.org/10.1038/ng.693 |
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