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Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet
The hypolithic microbial community associated with quartz pavement at a high-altitude tundra location in central Tibet is described. A small-scale ecological survey indicated that 36% of quartz rocks were colonized. Community profiling using terminal restriction fragment length polymorphism revealed...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Springer-Verlag
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2974210/ https://www.ncbi.nlm.nih.gov/pubmed/20336290 http://dx.doi.org/10.1007/s00248-010-9653-2 |
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author | Wong, Fiona K. Y. Lacap, Donnabella C. Lau, Maggie C. Y. Aitchison, J. C. Cowan, Donald A. Pointing, Stephen B. |
author_facet | Wong, Fiona K. Y. Lacap, Donnabella C. Lau, Maggie C. Y. Aitchison, J. C. Cowan, Donald A. Pointing, Stephen B. |
author_sort | Wong, Fiona K. Y. |
collection | PubMed |
description | The hypolithic microbial community associated with quartz pavement at a high-altitude tundra location in central Tibet is described. A small-scale ecological survey indicated that 36% of quartz rocks were colonized. Community profiling using terminal restriction fragment length polymorphism revealed no significant difference in community structure among a number of colonized rocks. Real-time quantitative PCR and phylogenetic analysis of environmental phylotypes obtained from clone libraries were used to elucidate community structure across all domains. The hypolithon was dominated by cyanobacterial phylotypes (73%) with relatively low frequencies of other bacterial phylotypes, largely represented by the chloroflexi, actinobacteria, and bacteriodetes. Unidentified crenarchaeal phylotypes accounted for 4% of recoverable phylotypes, while algae, fungi, and mosses were indicated by a small fraction of recoverable phylotypes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s00248-010-9653-2) contains supplementary material, which is available to authorized users. |
format | Text |
id | pubmed-2974210 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Springer-Verlag |
record_format | MEDLINE/PubMed |
spelling | pubmed-29742102010-11-29 Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet Wong, Fiona K. Y. Lacap, Donnabella C. Lau, Maggie C. Y. Aitchison, J. C. Cowan, Donald A. Pointing, Stephen B. Microb Ecol Environmental Microbiology The hypolithic microbial community associated with quartz pavement at a high-altitude tundra location in central Tibet is described. A small-scale ecological survey indicated that 36% of quartz rocks were colonized. Community profiling using terminal restriction fragment length polymorphism revealed no significant difference in community structure among a number of colonized rocks. Real-time quantitative PCR and phylogenetic analysis of environmental phylotypes obtained from clone libraries were used to elucidate community structure across all domains. The hypolithon was dominated by cyanobacterial phylotypes (73%) with relatively low frequencies of other bacterial phylotypes, largely represented by the chloroflexi, actinobacteria, and bacteriodetes. Unidentified crenarchaeal phylotypes accounted for 4% of recoverable phylotypes, while algae, fungi, and mosses were indicated by a small fraction of recoverable phylotypes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s00248-010-9653-2) contains supplementary material, which is available to authorized users. Springer-Verlag 2010-03-25 2010 /pmc/articles/PMC2974210/ /pubmed/20336290 http://dx.doi.org/10.1007/s00248-010-9653-2 Text en © The Author(s) 2010 https://creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution Noncommercial License which permits any noncommercial use, distribution, and reproduction in any medium, provided the original author(s) and source are credited. |
spellingShingle | Environmental Microbiology Wong, Fiona K. Y. Lacap, Donnabella C. Lau, Maggie C. Y. Aitchison, J. C. Cowan, Donald A. Pointing, Stephen B. Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet |
title | Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet |
title_full | Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet |
title_fullStr | Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet |
title_full_unstemmed | Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet |
title_short | Hypolithic Microbial Community of Quartz Pavement in the High-Altitude Tundra of Central Tibet |
title_sort | hypolithic microbial community of quartz pavement in the high-altitude tundra of central tibet |
topic | Environmental Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2974210/ https://www.ncbi.nlm.nih.gov/pubmed/20336290 http://dx.doi.org/10.1007/s00248-010-9653-2 |
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