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EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β

Regulation of gene expression requires transcription factor binding to specific DNA elements, and a large body of work has focused on the identification of such sequences. However, it is becoming increasingly clear that eukaryotic transcription factors can exhibit widespread, nonfunctional binding t...

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Detalles Bibliográficos
Autores principales: Judah, David, Chang, Wing Y., Dagnino, Lina
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2978110/
https://www.ncbi.nlm.nih.gov/pubmed/21085677
http://dx.doi.org/10.1371/journal.pone.0013941
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author Judah, David
Chang, Wing Y.
Dagnino, Lina
author_facet Judah, David
Chang, Wing Y.
Dagnino, Lina
author_sort Judah, David
collection PubMed
description Regulation of gene expression requires transcription factor binding to specific DNA elements, and a large body of work has focused on the identification of such sequences. However, it is becoming increasingly clear that eukaryotic transcription factors can exhibit widespread, nonfunctional binding to genomic DNA sites. Conversely, some of these proteins, such as E2F, can also modulate gene expression by binding to non-consensus elements. E2F comprises a family of transcription factors that play key roles in a wide variety of cellular functions, including survival, differentiation, activation during tissue regeneration, metabolism, and proliferation. E2F factors bind to the Erb3-binding protein 1 (EBP1) promoter in live cells. We now show that E2F binding to the EBP1 promoter occurs through two tandem DNA elements that do not conform to typical consensus E2F motifs. Exogenously expressed E2F1 activates EBP1 reporters lacking one, but not both sites, suggesting a degree of redundancy under certain conditions. E2F1 increases the levels of endogenous EBP1 mRNA in breast carcinoma and other transformed cell lines. In contrast, in non-transformed primary epidermal keratinocytes, E2F, together with the retinoblastoma family of proteins, appears to be involved in decreasing EBP1 mRNA abundance in response to growth inhibition by transforming growth factor-β1. Thus, E2F is likely a central coordinator of multiple responses that culminate in regulation of EBP1 gene expression, and which may vary depending on cell type and context.
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spelling pubmed-29781102010-11-17 EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β Judah, David Chang, Wing Y. Dagnino, Lina PLoS One Research Article Regulation of gene expression requires transcription factor binding to specific DNA elements, and a large body of work has focused on the identification of such sequences. However, it is becoming increasingly clear that eukaryotic transcription factors can exhibit widespread, nonfunctional binding to genomic DNA sites. Conversely, some of these proteins, such as E2F, can also modulate gene expression by binding to non-consensus elements. E2F comprises a family of transcription factors that play key roles in a wide variety of cellular functions, including survival, differentiation, activation during tissue regeneration, metabolism, and proliferation. E2F factors bind to the Erb3-binding protein 1 (EBP1) promoter in live cells. We now show that E2F binding to the EBP1 promoter occurs through two tandem DNA elements that do not conform to typical consensus E2F motifs. Exogenously expressed E2F1 activates EBP1 reporters lacking one, but not both sites, suggesting a degree of redundancy under certain conditions. E2F1 increases the levels of endogenous EBP1 mRNA in breast carcinoma and other transformed cell lines. In contrast, in non-transformed primary epidermal keratinocytes, E2F, together with the retinoblastoma family of proteins, appears to be involved in decreasing EBP1 mRNA abundance in response to growth inhibition by transforming growth factor-β1. Thus, E2F is likely a central coordinator of multiple responses that culminate in regulation of EBP1 gene expression, and which may vary depending on cell type and context. Public Library of Science 2010-11-10 /pmc/articles/PMC2978110/ /pubmed/21085677 http://dx.doi.org/10.1371/journal.pone.0013941 Text en Judah et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Judah, David
Chang, Wing Y.
Dagnino, Lina
EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β
title EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β
title_full EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β
title_fullStr EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β
title_full_unstemmed EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β
title_short EBP1 Is a Novel E2F Target Gene Regulated by Transforming Growth Factor-β
title_sort ebp1 is a novel e2f target gene regulated by transforming growth factor-β
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2978110/
https://www.ncbi.nlm.nih.gov/pubmed/21085677
http://dx.doi.org/10.1371/journal.pone.0013941
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