Cargando…

Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri

The development of systemic approaches in biology has put emphasis on identifying genetic modules whose behavior can be modeled accurately so as to gain insight into their structure and function. However, most gene circuits in a cell are under control of external signals and thus, quantitative agree...

Descripción completa

Detalles Bibliográficos
Autores principales: Thommen, Quentin, Pfeuty, Benjamin, Morant, Pierre-Emmanuel, Corellou, Florence, Bouget, François-Yves, Lefranc, Marc
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2978692/
https://www.ncbi.nlm.nih.gov/pubmed/21085637
http://dx.doi.org/10.1371/journal.pcbi.1000990
_version_ 1782191283750567936
author Thommen, Quentin
Pfeuty, Benjamin
Morant, Pierre-Emmanuel
Corellou, Florence
Bouget, François-Yves
Lefranc, Marc
author_facet Thommen, Quentin
Pfeuty, Benjamin
Morant, Pierre-Emmanuel
Corellou, Florence
Bouget, François-Yves
Lefranc, Marc
author_sort Thommen, Quentin
collection PubMed
description The development of systemic approaches in biology has put emphasis on identifying genetic modules whose behavior can be modeled accurately so as to gain insight into their structure and function. However, most gene circuits in a cell are under control of external signals and thus, quantitative agreement between experimental data and a mathematical model is difficult. Circadian biology has been one notable exception: quantitative models of the internal clock that orchestrates biological processes over the 24-hour diurnal cycle have been constructed for a few organisms, from cyanobacteria to plants and mammals. In most cases, a complex architecture with interlocked feedback loops has been evidenced. Here we present the first modeling results for the circadian clock of the green unicellular alga Ostreococcus tauri. Two plant-like clock genes have been shown to play a central role in the Ostreococcus clock. We find that their expression time profiles can be accurately reproduced by a minimal model of a two-gene transcriptional feedback loop. Remarkably, best adjustment of data recorded under light/dark alternation is obtained when assuming that the oscillator is not coupled to the diurnal cycle. This suggests that coupling to light is confined to specific time intervals and has no dynamical effect when the oscillator is entrained by the diurnal cycle. This intringuing property may reflect a strategy to minimize the impact of fluctuations in daylight intensity on the core circadian oscillator, a type of perturbation that has been rarely considered when assessing the robustness of circadian clocks.
format Text
id pubmed-2978692
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-29786922010-11-17 Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri Thommen, Quentin Pfeuty, Benjamin Morant, Pierre-Emmanuel Corellou, Florence Bouget, François-Yves Lefranc, Marc PLoS Comput Biol Research Article The development of systemic approaches in biology has put emphasis on identifying genetic modules whose behavior can be modeled accurately so as to gain insight into their structure and function. However, most gene circuits in a cell are under control of external signals and thus, quantitative agreement between experimental data and a mathematical model is difficult. Circadian biology has been one notable exception: quantitative models of the internal clock that orchestrates biological processes over the 24-hour diurnal cycle have been constructed for a few organisms, from cyanobacteria to plants and mammals. In most cases, a complex architecture with interlocked feedback loops has been evidenced. Here we present the first modeling results for the circadian clock of the green unicellular alga Ostreococcus tauri. Two plant-like clock genes have been shown to play a central role in the Ostreococcus clock. We find that their expression time profiles can be accurately reproduced by a minimal model of a two-gene transcriptional feedback loop. Remarkably, best adjustment of data recorded under light/dark alternation is obtained when assuming that the oscillator is not coupled to the diurnal cycle. This suggests that coupling to light is confined to specific time intervals and has no dynamical effect when the oscillator is entrained by the diurnal cycle. This intringuing property may reflect a strategy to minimize the impact of fluctuations in daylight intensity on the core circadian oscillator, a type of perturbation that has been rarely considered when assessing the robustness of circadian clocks. Public Library of Science 2010-11-11 /pmc/articles/PMC2978692/ /pubmed/21085637 http://dx.doi.org/10.1371/journal.pcbi.1000990 Text en Thommen et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Thommen, Quentin
Pfeuty, Benjamin
Morant, Pierre-Emmanuel
Corellou, Florence
Bouget, François-Yves
Lefranc, Marc
Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri
title Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri
title_full Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri
title_fullStr Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri
title_full_unstemmed Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri
title_short Robustness of Circadian Clocks to Daylight Fluctuations: Hints from the Picoeucaryote Ostreococcus tauri
title_sort robustness of circadian clocks to daylight fluctuations: hints from the picoeucaryote ostreococcus tauri
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2978692/
https://www.ncbi.nlm.nih.gov/pubmed/21085637
http://dx.doi.org/10.1371/journal.pcbi.1000990
work_keys_str_mv AT thommenquentin robustnessofcircadianclockstodaylightfluctuationshintsfromthepicoeucaryoteostreococcustauri
AT pfeutybenjamin robustnessofcircadianclockstodaylightfluctuationshintsfromthepicoeucaryoteostreococcustauri
AT morantpierreemmanuel robustnessofcircadianclockstodaylightfluctuationshintsfromthepicoeucaryoteostreococcustauri
AT corellouflorence robustnessofcircadianclockstodaylightfluctuationshintsfromthepicoeucaryoteostreococcustauri
AT bougetfrancoisyves robustnessofcircadianclockstodaylightfluctuationshintsfromthepicoeucaryoteostreococcustauri
AT lefrancmarc robustnessofcircadianclockstodaylightfluctuationshintsfromthepicoeucaryoteostreococcustauri