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Information Discovery on Electronic Health Records Using Authority Flow Techniques

BACKGROUND: As the use of electronic health records (EHRs) becomes more widespread, so does the need to search and provide effective information discovery within them. Querying by keyword has emerged as one of the most effective paradigms for searching. Most work in this area is based on traditional...

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Autores principales: Hristidis, Vagelis, Varadarajan, Ramakrishna R, Biondich, Paul, Weiner, Michael
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2984470/
https://www.ncbi.nlm.nih.gov/pubmed/20969780
http://dx.doi.org/10.1186/1472-6947-10-64
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author Hristidis, Vagelis
Varadarajan, Ramakrishna R
Biondich, Paul
Weiner, Michael
author_facet Hristidis, Vagelis
Varadarajan, Ramakrishna R
Biondich, Paul
Weiner, Michael
author_sort Hristidis, Vagelis
collection PubMed
description BACKGROUND: As the use of electronic health records (EHRs) becomes more widespread, so does the need to search and provide effective information discovery within them. Querying by keyword has emerged as one of the most effective paradigms for searching. Most work in this area is based on traditional Information Retrieval (IR) techniques, where each document is compared individually against the query. We compare the effectiveness of two fundamentally different techniques for keyword search of EHRs. METHODS: We built two ranking systems. The traditional BM25 system exploits the EHRs' content without regard to association among entities within. The Clinical ObjectRank (CO) system exploits the entities' associations in EHRs using an authority-flow algorithm to discover the most relevant entities. BM25 and CO were deployed on an EHR dataset of the cardiovascular division of Miami Children's Hospital. Using sequences of keywords as queries, sensitivity and specificity were measured by two physicians for a set of 11 queries related to congenital cardiac disease. RESULTS: Our pilot evaluation showed that CO outperforms BM25 in terms of sensitivity (65% vs. 38%) by 71% on average, while maintaining the specificity (64% vs. 61%). The evaluation was done by two physicians. CONCLUSIONS: Authority-flow techniques can greatly improve the detection of relevant information in EHRs and hence deserve further study.
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spelling pubmed-29844702010-11-22 Information Discovery on Electronic Health Records Using Authority Flow Techniques Hristidis, Vagelis Varadarajan, Ramakrishna R Biondich, Paul Weiner, Michael BMC Med Inform Decis Mak Research Article BACKGROUND: As the use of electronic health records (EHRs) becomes more widespread, so does the need to search and provide effective information discovery within them. Querying by keyword has emerged as one of the most effective paradigms for searching. Most work in this area is based on traditional Information Retrieval (IR) techniques, where each document is compared individually against the query. We compare the effectiveness of two fundamentally different techniques for keyword search of EHRs. METHODS: We built two ranking systems. The traditional BM25 system exploits the EHRs' content without regard to association among entities within. The Clinical ObjectRank (CO) system exploits the entities' associations in EHRs using an authority-flow algorithm to discover the most relevant entities. BM25 and CO were deployed on an EHR dataset of the cardiovascular division of Miami Children's Hospital. Using sequences of keywords as queries, sensitivity and specificity were measured by two physicians for a set of 11 queries related to congenital cardiac disease. RESULTS: Our pilot evaluation showed that CO outperforms BM25 in terms of sensitivity (65% vs. 38%) by 71% on average, while maintaining the specificity (64% vs. 61%). The evaluation was done by two physicians. CONCLUSIONS: Authority-flow techniques can greatly improve the detection of relevant information in EHRs and hence deserve further study. BioMed Central 2010-10-22 /pmc/articles/PMC2984470/ /pubmed/20969780 http://dx.doi.org/10.1186/1472-6947-10-64 Text en Copyright ©2010 Hristidis et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Hristidis, Vagelis
Varadarajan, Ramakrishna R
Biondich, Paul
Weiner, Michael
Information Discovery on Electronic Health Records Using Authority Flow Techniques
title Information Discovery on Electronic Health Records Using Authority Flow Techniques
title_full Information Discovery on Electronic Health Records Using Authority Flow Techniques
title_fullStr Information Discovery on Electronic Health Records Using Authority Flow Techniques
title_full_unstemmed Information Discovery on Electronic Health Records Using Authority Flow Techniques
title_short Information Discovery on Electronic Health Records Using Authority Flow Techniques
title_sort information discovery on electronic health records using authority flow techniques
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2984470/
https://www.ncbi.nlm.nih.gov/pubmed/20969780
http://dx.doi.org/10.1186/1472-6947-10-64
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