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Genome size variation in diploid and tetraploid wild wheats

BACKGROUND AND AIMS: Intra- and interspecific variations of C-values and the relationship between habitat factors and genome size were studied in natural populations of diploid and tetraploid wild wheats. METHODOLOGY: The 1C nuclear DNA content of 376 individual plants representing 41 populations of...

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Autores principales: Özkan, Hakan, Tuna, Metin, Kilian, Benjamin, Mori, Naoki, Ohta, Shoji
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2992354/
https://www.ncbi.nlm.nih.gov/pubmed/22476073
http://dx.doi.org/10.1093/aobpla/plq015
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author Özkan, Hakan
Tuna, Metin
Kilian, Benjamin
Mori, Naoki
Ohta, Shoji
author_facet Özkan, Hakan
Tuna, Metin
Kilian, Benjamin
Mori, Naoki
Ohta, Shoji
author_sort Özkan, Hakan
collection PubMed
description BACKGROUND AND AIMS: Intra- and interspecific variations of C-values and the relationship between habitat factors and genome size were studied in natural populations of diploid and tetraploid wild wheats. METHODOLOGY: The 1C nuclear DNA content of 376 individual plants representing 41 populations of diploid and tetraploid wild wheats was determined by flow cytometry (FCM) and correlated with geographical and bioclimate variables. PRINCIPAL RESULTS: Based on analysis of variance, significant differences between diploid and tetraploid Triticum species were found. Differences among populations of T. boeoticum and T. dicoccoides were also statistically significant and argue for isolation between populations, except for T. araraticum. However, the variation among individuals of the same population was not statistically significant. Maximum genome size differences among populations for T. boeoticum (0.143 pg; 2.32 %), T. dicoccoides (0.314 pg; 2.49 %) and T. araraticum (0.116 pg; 0.98 %) argue for genome constancy in these species. There was no significant correlation between intra-population variance and geographical and bioclimate variables for T. boeoticum and T. dicoccoides. In contrast to the limited genome size variation at the intraspecific level, the interspecific variation was large: ∼0.5 pg/1C (8 %) at the diploid level (T. boeoticum vs. T. urartu) and ∼1 pg/1C (9.7 %) at the tetraploid level (T. dicoccoides vs. T. araraticum). CONCLUSIONS: Low intraspecific genome size variation occurs in diploid and tetraploid wild wheats, and this limited variation is not correlated with geographical and climate variables. However, interspecific variation is significant at the diploid and tetraploid level. It can be concluded that the genome size of wild self-fertilizing Triticum species is generally stable, despite the presence of many potentially active retroelements. In natural habitats, it is very difficult to distinguish wild wheats from each other. However, all four species can be distinguished easily, quickly and unambiguously by using the FCM technique.
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spelling pubmed-29923542010-11-26 Genome size variation in diploid and tetraploid wild wheats Özkan, Hakan Tuna, Metin Kilian, Benjamin Mori, Naoki Ohta, Shoji AoB Plants Research Articles BACKGROUND AND AIMS: Intra- and interspecific variations of C-values and the relationship between habitat factors and genome size were studied in natural populations of diploid and tetraploid wild wheats. METHODOLOGY: The 1C nuclear DNA content of 376 individual plants representing 41 populations of diploid and tetraploid wild wheats was determined by flow cytometry (FCM) and correlated with geographical and bioclimate variables. PRINCIPAL RESULTS: Based on analysis of variance, significant differences between diploid and tetraploid Triticum species were found. Differences among populations of T. boeoticum and T. dicoccoides were also statistically significant and argue for isolation between populations, except for T. araraticum. However, the variation among individuals of the same population was not statistically significant. Maximum genome size differences among populations for T. boeoticum (0.143 pg; 2.32 %), T. dicoccoides (0.314 pg; 2.49 %) and T. araraticum (0.116 pg; 0.98 %) argue for genome constancy in these species. There was no significant correlation between intra-population variance and geographical and bioclimate variables for T. boeoticum and T. dicoccoides. In contrast to the limited genome size variation at the intraspecific level, the interspecific variation was large: ∼0.5 pg/1C (8 %) at the diploid level (T. boeoticum vs. T. urartu) and ∼1 pg/1C (9.7 %) at the tetraploid level (T. dicoccoides vs. T. araraticum). CONCLUSIONS: Low intraspecific genome size variation occurs in diploid and tetraploid wild wheats, and this limited variation is not correlated with geographical and climate variables. However, interspecific variation is significant at the diploid and tetraploid level. It can be concluded that the genome size of wild self-fertilizing Triticum species is generally stable, despite the presence of many potentially active retroelements. In natural habitats, it is very difficult to distinguish wild wheats from each other. However, all four species can be distinguished easily, quickly and unambiguously by using the FCM technique. Oxford University Press 2010 2010-09-30 /pmc/articles/PMC2992354/ /pubmed/22476073 http://dx.doi.org/10.1093/aobpla/plq015 Text en © The Authors 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Özkan, Hakan
Tuna, Metin
Kilian, Benjamin
Mori, Naoki
Ohta, Shoji
Genome size variation in diploid and tetraploid wild wheats
title Genome size variation in diploid and tetraploid wild wheats
title_full Genome size variation in diploid and tetraploid wild wheats
title_fullStr Genome size variation in diploid and tetraploid wild wheats
title_full_unstemmed Genome size variation in diploid and tetraploid wild wheats
title_short Genome size variation in diploid and tetraploid wild wheats
title_sort genome size variation in diploid and tetraploid wild wheats
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2992354/
https://www.ncbi.nlm.nih.gov/pubmed/22476073
http://dx.doi.org/10.1093/aobpla/plq015
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AT ohtashoji genomesizevariationindiploidandtetraploidwildwheats