Cargando…
Error correction of next-generation sequencing data and reliable estimation of HIV quasispecies
Next-generation sequencing technologies can be used to analyse genetically heterogeneous samples at unprecedented detail. The high coverage achievable with these methods enables the detection of many low-frequency variants. However, sequencing errors complicate the analysis of mixed populations and...
Autores principales: | Zagordi, Osvaldo, Klein, Rolf, Däumer, Martin, Beerenwinkel, Niko |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2010
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2995073/ https://www.ncbi.nlm.nih.gov/pubmed/20671025 http://dx.doi.org/10.1093/nar/gkq655 |
Ejemplares similares
-
Read length versus Depth of Coverage for Viral Quasispecies Reconstruction
por: Zagordi, Osvaldo, et al.
Publicado: (2012) -
ShoRAH: estimating the genetic diversity of a mixed sample from next-generation sequencing data
por: Zagordi, Osvaldo, et al.
Publicado: (2011) -
Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination
por: Di Giallonardo, Francesca, et al.
Publicado: (2013) -
Viral Quasispecies Assembly via Maximal Clique Enumeration
por: Töpfer, Armin, et al.
Publicado: (2014) -
Ultradeep Pyrosequencing of Hepatitis C Virus Hypervariable Region 1 in Quasispecies Analysis
por: Caraballo Cortés, Kamila, et al.
Publicado: (2013)