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Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases
Chelt, a cholera-like toxin from Vibrio cholerae, and Certhrax, an anthrax-like toxin from Bacillus cereus, are among six new bacterial protein toxins we identified and characterized using in silico and cell-based techniques. We also uncovered medically relevant toxins from Mycobacterium avium and E...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3000352/ https://www.ncbi.nlm.nih.gov/pubmed/21170356 http://dx.doi.org/10.1371/journal.pcbi.1001029 |
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author | Fieldhouse, Robert J. Turgeon, Zachari White, Dawn Merrill, A. Rod |
author_facet | Fieldhouse, Robert J. Turgeon, Zachari White, Dawn Merrill, A. Rod |
author_sort | Fieldhouse, Robert J. |
collection | PubMed |
description | Chelt, a cholera-like toxin from Vibrio cholerae, and Certhrax, an anthrax-like toxin from Bacillus cereus, are among six new bacterial protein toxins we identified and characterized using in silico and cell-based techniques. We also uncovered medically relevant toxins from Mycobacterium avium and Enterococcus faecalis. We found agriculturally relevant toxins in Photorhabdus luminescens and Vibrio splendidus. These toxins belong to the ADP-ribosyltransferase family that has conserved structure despite low sequence identity. Therefore, our search for new toxins combined fold recognition with rules for filtering sequences – including a primary sequence pattern – to reduce reliance on sequence identity and identify toxins using structure. We used computers to build models and analyzed each new toxin to understand features including: structure, secretion, cell entry, activation, NAD(+) substrate binding, intracellular target binding and the reaction mechanism. We confirmed activity using a yeast growth test. In this era where an expanding protein structure library complements abundant protein sequence data – and we need high-throughput validation – our approach provides insight into the newest toxin ADP-ribosyltransferases. |
format | Text |
id | pubmed-3000352 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-30003522010-12-17 Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases Fieldhouse, Robert J. Turgeon, Zachari White, Dawn Merrill, A. Rod PLoS Comput Biol Research Article Chelt, a cholera-like toxin from Vibrio cholerae, and Certhrax, an anthrax-like toxin from Bacillus cereus, are among six new bacterial protein toxins we identified and characterized using in silico and cell-based techniques. We also uncovered medically relevant toxins from Mycobacterium avium and Enterococcus faecalis. We found agriculturally relevant toxins in Photorhabdus luminescens and Vibrio splendidus. These toxins belong to the ADP-ribosyltransferase family that has conserved structure despite low sequence identity. Therefore, our search for new toxins combined fold recognition with rules for filtering sequences – including a primary sequence pattern – to reduce reliance on sequence identity and identify toxins using structure. We used computers to build models and analyzed each new toxin to understand features including: structure, secretion, cell entry, activation, NAD(+) substrate binding, intracellular target binding and the reaction mechanism. We confirmed activity using a yeast growth test. In this era where an expanding protein structure library complements abundant protein sequence data – and we need high-throughput validation – our approach provides insight into the newest toxin ADP-ribosyltransferases. Public Library of Science 2010-12-09 /pmc/articles/PMC3000352/ /pubmed/21170356 http://dx.doi.org/10.1371/journal.pcbi.1001029 Text en Fieldhouse et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Fieldhouse, Robert J. Turgeon, Zachari White, Dawn Merrill, A. Rod Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases |
title | Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases |
title_full | Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases |
title_fullStr | Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases |
title_full_unstemmed | Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases |
title_short | Cholera- and Anthrax-Like Toxins Are among Several New ADP-Ribosyltransferases |
title_sort | cholera- and anthrax-like toxins are among several new adp-ribosyltransferases |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3000352/ https://www.ncbi.nlm.nih.gov/pubmed/21170356 http://dx.doi.org/10.1371/journal.pcbi.1001029 |
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