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The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses

BACKGROUND: Proton Magnetic Resonance (MR) Spectroscopy (MRS) is a widely available technique for those clinical centres equipped with MR scanners. Unlike the rest of MR-based techniques, MRS yields not images but spectra of metabolites in the tissues. In pathological situations, the MRS profile cha...

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Autores principales: Pérez-Ruiz, Alexander, Julià-Sapé, Margarida, Mercadal, Guillem, Olier, Iván, Majós, Carles, Arús, Carles
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3004884/
https://www.ncbi.nlm.nih.gov/pubmed/21114820
http://dx.doi.org/10.1186/1471-2105-11-581
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author Pérez-Ruiz, Alexander
Julià-Sapé, Margarida
Mercadal, Guillem
Olier, Iván
Majós, Carles
Arús, Carles
author_facet Pérez-Ruiz, Alexander
Julià-Sapé, Margarida
Mercadal, Guillem
Olier, Iván
Majós, Carles
Arús, Carles
author_sort Pérez-Ruiz, Alexander
collection PubMed
description BACKGROUND: Proton Magnetic Resonance (MR) Spectroscopy (MRS) is a widely available technique for those clinical centres equipped with MR scanners. Unlike the rest of MR-based techniques, MRS yields not images but spectra of metabolites in the tissues. In pathological situations, the MRS profile changes and this has been particularly described for brain tumours. However, radiologists are frequently not familiar to the interpretation of MRS data and for this reason, the usefulness of decision-support systems (DSS) in MRS data analysis has been explored. RESULTS: This work presents the INTERPRET DSS version 3.0, analysing the improvements made from its first release in 2002. Version 3.0 is aimed to be a program that 1(st), can be easily used with any new case from any MR scanner manufacturer and 2(nd), improves the initial analysis capabilities of the first version. The main improvements are an embedded database, user accounts, more diagnostic discrimination capabilities and the possibility to analyse data acquired under additional data acquisition conditions. Other improvements include a customisable graphical user interface (GUI). Most diagnostic problems included have been addressed through a pattern-recognition based approach, in which classifiers based on linear discriminant analysis (LDA) were trained and tested. CONCLUSIONS: The INTERPRET DSS 3.0 allows radiologists, medical physicists, biochemists or, generally speaking, any person with a minimum knowledge of what an MR spectrum is, to enter their own SV raw data, acquired at 1.5 T, and to analyse them. The system is expected to help in the categorisation of MR Spectra from abnormal brain masses.
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spelling pubmed-30048842010-12-21 The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses Pérez-Ruiz, Alexander Julià-Sapé, Margarida Mercadal, Guillem Olier, Iván Majós, Carles Arús, Carles BMC Bioinformatics Software BACKGROUND: Proton Magnetic Resonance (MR) Spectroscopy (MRS) is a widely available technique for those clinical centres equipped with MR scanners. Unlike the rest of MR-based techniques, MRS yields not images but spectra of metabolites in the tissues. In pathological situations, the MRS profile changes and this has been particularly described for brain tumours. However, radiologists are frequently not familiar to the interpretation of MRS data and for this reason, the usefulness of decision-support systems (DSS) in MRS data analysis has been explored. RESULTS: This work presents the INTERPRET DSS version 3.0, analysing the improvements made from its first release in 2002. Version 3.0 is aimed to be a program that 1(st), can be easily used with any new case from any MR scanner manufacturer and 2(nd), improves the initial analysis capabilities of the first version. The main improvements are an embedded database, user accounts, more diagnostic discrimination capabilities and the possibility to analyse data acquired under additional data acquisition conditions. Other improvements include a customisable graphical user interface (GUI). Most diagnostic problems included have been addressed through a pattern-recognition based approach, in which classifiers based on linear discriminant analysis (LDA) were trained and tested. CONCLUSIONS: The INTERPRET DSS 3.0 allows radiologists, medical physicists, biochemists or, generally speaking, any person with a minimum knowledge of what an MR spectrum is, to enter their own SV raw data, acquired at 1.5 T, and to analyse them. The system is expected to help in the categorisation of MR Spectra from abnormal brain masses. BioMed Central 2010-11-29 /pmc/articles/PMC3004884/ /pubmed/21114820 http://dx.doi.org/10.1186/1471-2105-11-581 Text en Copyright ©2010 Pérez-Ruiz et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software
Pérez-Ruiz, Alexander
Julià-Sapé, Margarida
Mercadal, Guillem
Olier, Iván
Majós, Carles
Arús, Carles
The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses
title The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses
title_full The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses
title_fullStr The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses
title_full_unstemmed The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses
title_short The INTERPRET Decision-Support System version 3.0 for evaluation of Magnetic Resonance Spectroscopy data from human brain tumours and other abnormal brain masses
title_sort interpret decision-support system version 3.0 for evaluation of magnetic resonance spectroscopy data from human brain tumours and other abnormal brain masses
topic Software
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3004884/
https://www.ncbi.nlm.nih.gov/pubmed/21114820
http://dx.doi.org/10.1186/1471-2105-11-581
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