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Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors
BACKGROUND: Many chronic human diseases are of unclear origin, and persist long beyond any known insult or instigating factor. These diseases may represent a structurally normal biologic network that has become trapped within the basin of an abnormal attractor. METHODOLOGY/PRINCIPAL FINDINGS: We use...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3008716/ https://www.ncbi.nlm.nih.gov/pubmed/21203505 http://dx.doi.org/10.1371/journal.pone.0014413 |
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author | Anafi, Ron C. Bates, Jason H. T. |
author_facet | Anafi, Ron C. Bates, Jason H. T. |
author_sort | Anafi, Ron C. |
collection | PubMed |
description | BACKGROUND: Many chronic human diseases are of unclear origin, and persist long beyond any known insult or instigating factor. These diseases may represent a structurally normal biologic network that has become trapped within the basin of an abnormal attractor. METHODOLOGY/PRINCIPAL FINDINGS: We used the Hopfield net as the archetypical example of a dynamic biological network. By progressively removing the links of fully connected Hopfield nets, we found that a designated attractor of the nets could still be supported until only slightly more than 1 link per node remained. As the number of links approached this minimum value, the rate of convergence to this attractor from an arbitrary starting state increased dramatically. Furthermore, with more than about twice the minimum of links, the net became increasingly able to support a second attractor. CONCLUSIONS/SIGNIFICANCE: We speculate that homeostatic biological networks may have evolved to assume a degree of connectivity that balances robustness and agility against the dangers of becoming trapped in an abnormal attractor. |
format | Text |
id | pubmed-3008716 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-30087162011-01-03 Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors Anafi, Ron C. Bates, Jason H. T. PLoS One Research Article BACKGROUND: Many chronic human diseases are of unclear origin, and persist long beyond any known insult or instigating factor. These diseases may represent a structurally normal biologic network that has become trapped within the basin of an abnormal attractor. METHODOLOGY/PRINCIPAL FINDINGS: We used the Hopfield net as the archetypical example of a dynamic biological network. By progressively removing the links of fully connected Hopfield nets, we found that a designated attractor of the nets could still be supported until only slightly more than 1 link per node remained. As the number of links approached this minimum value, the rate of convergence to this attractor from an arbitrary starting state increased dramatically. Furthermore, with more than about twice the minimum of links, the net became increasingly able to support a second attractor. CONCLUSIONS/SIGNIFICANCE: We speculate that homeostatic biological networks may have evolved to assume a degree of connectivity that balances robustness and agility against the dangers of becoming trapped in an abnormal attractor. Public Library of Science 2010-12-22 /pmc/articles/PMC3008716/ /pubmed/21203505 http://dx.doi.org/10.1371/journal.pone.0014413 Text en Anafi, Bates. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Anafi, Ron C. Bates, Jason H. T. Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors |
title | Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors |
title_full | Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors |
title_fullStr | Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors |
title_full_unstemmed | Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors |
title_short | Balancing Robustness against the Dangers of Multiple Attractors in a Hopfield-Type Model of Biological Attractors |
title_sort | balancing robustness against the dangers of multiple attractors in a hopfield-type model of biological attractors |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3008716/ https://www.ncbi.nlm.nih.gov/pubmed/21203505 http://dx.doi.org/10.1371/journal.pone.0014413 |
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