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Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspective
BACKGROUND: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly uses highly coupled Dynamic Programming (DP) solutions. The problem scale and complexity become embarrassingly humungous...
Autores principales: | Krishnan, SPT, Liang, Sim Sze, Veeravalli, Bharadwaj |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3009508/ https://www.ncbi.nlm.nih.gov/pubmed/20122209 http://dx.doi.org/10.1186/1471-2105-11-S1-S36 |
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