Cargando…

Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing

Due to the call for fast KRAS mutation status analysis for treatment of patients with monoclonal antibodies for metastatic colorectal cancer, sensitive, economic, and easily feasible methods are required. Under this aspect, the sensitivity and specificity of the SNaPshot analysis in comparison to th...

Descripción completa

Detalles Bibliográficos
Autores principales: Zinsky, Rica, Bölükbas, Servet, Bartsch, Holger, Schirren, Joachim, Fisseler-Eckhoff, Annette
Formato: Texto
Lenguaje:English
Publicado: Hindawi Publishing Corporation 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3010661/
https://www.ncbi.nlm.nih.gov/pubmed/21197450
http://dx.doi.org/10.1155/2010/789363
_version_ 1782194816522649600
author Zinsky, Rica
Bölükbas, Servet
Bartsch, Holger
Schirren, Joachim
Fisseler-Eckhoff, Annette
author_facet Zinsky, Rica
Bölükbas, Servet
Bartsch, Holger
Schirren, Joachim
Fisseler-Eckhoff, Annette
author_sort Zinsky, Rica
collection PubMed
description Due to the call for fast KRAS mutation status analysis for treatment of patients with monoclonal antibodies for metastatic colorectal cancer, sensitive, economic, and easily feasible methods are required. Under this aspect, the sensitivity and specificity of the SNaPshot analysis in comparison to the commonly used DNA sequencing was checked. We examined KRAS mutations in exon 2 codons 12 and 13 with DNA sequencing and SNaPshot analysis in 100 formalin-fixed paraffin-embedded tumor tissue samples of pancreatic carcinoma, colorectal carcinoma, and nonsmall cell lung cancer specimens of the primary tumor or metastases. 40% of these samples demonstrated mutated KRAS genes using sequencing and SNaPshot-analysis; additional five samples (45/100) were identified only with the SNaPshot. KRAS mutation detection is feasible with the reliable SNaPshot analysis method. The more frequent mutation detection by the SNaPshot analysis shows that this method has a high probability of accuracy in the detection of KRAS mutations compared to sequencing.
format Text
id pubmed-3010661
institution National Center for Biotechnology Information
language English
publishDate 2010
publisher Hindawi Publishing Corporation
record_format MEDLINE/PubMed
spelling pubmed-30106612010-12-30 Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing Zinsky, Rica Bölükbas, Servet Bartsch, Holger Schirren, Joachim Fisseler-Eckhoff, Annette Gastroenterol Res Pract Research Article Due to the call for fast KRAS mutation status analysis for treatment of patients with monoclonal antibodies for metastatic colorectal cancer, sensitive, economic, and easily feasible methods are required. Under this aspect, the sensitivity and specificity of the SNaPshot analysis in comparison to the commonly used DNA sequencing was checked. We examined KRAS mutations in exon 2 codons 12 and 13 with DNA sequencing and SNaPshot analysis in 100 formalin-fixed paraffin-embedded tumor tissue samples of pancreatic carcinoma, colorectal carcinoma, and nonsmall cell lung cancer specimens of the primary tumor or metastases. 40% of these samples demonstrated mutated KRAS genes using sequencing and SNaPshot-analysis; additional five samples (45/100) were identified only with the SNaPshot. KRAS mutation detection is feasible with the reliable SNaPshot analysis method. The more frequent mutation detection by the SNaPshot analysis shows that this method has a high probability of accuracy in the detection of KRAS mutations compared to sequencing. Hindawi Publishing Corporation 2010 2010-12-21 /pmc/articles/PMC3010661/ /pubmed/21197450 http://dx.doi.org/10.1155/2010/789363 Text en Copyright © 2010 Rica Zinsky et al. https://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zinsky, Rica
Bölükbas, Servet
Bartsch, Holger
Schirren, Joachim
Fisseler-Eckhoff, Annette
Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing
title Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing
title_full Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing
title_fullStr Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing
title_full_unstemmed Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing
title_short Analysis of KRAS Mutations of Exon 2 Codons 12 and 13 by SNaPshot Analysis in Comparison to Common DNA Sequencing
title_sort analysis of kras mutations of exon 2 codons 12 and 13 by snapshot analysis in comparison to common dna sequencing
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3010661/
https://www.ncbi.nlm.nih.gov/pubmed/21197450
http://dx.doi.org/10.1155/2010/789363
work_keys_str_mv AT zinskyrica analysisofkrasmutationsofexon2codons12and13bysnapshotanalysisincomparisontocommondnasequencing
AT bolukbasservet analysisofkrasmutationsofexon2codons12and13bysnapshotanalysisincomparisontocommondnasequencing
AT bartschholger analysisofkrasmutationsofexon2codons12and13bysnapshotanalysisincomparisontocommondnasequencing
AT schirrenjoachim analysisofkrasmutationsofexon2codons12and13bysnapshotanalysisincomparisontocommondnasequencing
AT fisselereckhoffannette analysisofkrasmutationsofexon2codons12and13bysnapshotanalysisincomparisontocommondnasequencing