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PROMISCUOUS: a database for network-based drug-repositioning

The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, t...

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Detalles Bibliográficos
Autores principales: von Eichborn, Joachim, Murgueitio, Manuela S., Dunkel, Mathias, Koerner, Soeren, Bourne, Philip E., Preissner, Robert
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013657/
https://www.ncbi.nlm.nih.gov/pubmed/21071407
http://dx.doi.org/10.1093/nar/gkq1037
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author von Eichborn, Joachim
Murgueitio, Manuela S.
Dunkel, Mathias
Koerner, Soeren
Bourne, Philip E.
Preissner, Robert
author_facet von Eichborn, Joachim
Murgueitio, Manuela S.
Dunkel, Mathias
Koerner, Soeren
Bourne, Philip E.
Preissner, Robert
author_sort von Eichborn, Joachim
collection PubMed
description The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, the knowledge, understanding and prediction of so-called off-target effects allow a rational approach to the understanding of side-effects. With PROMISCUOUS we provide an exhaustive set of drugs (25 000), including withdrawn or experimental drugs, annotated with drug–protein and protein–protein relationships (21 500/104 000) compiled from public resources via text and data mining including manual curation. Measures of structural similarity for drugs as well as known side-effects can be easily connected to protein–protein interactions to establish and analyse networks responsible for multi-pharmacology. This network-based approach can provide a starting point for drug-repositioning. PROMISCUOUS is publicly available at http://bioinformatics.charite.de/promiscuous.
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spelling pubmed-30136572011-01-03 PROMISCUOUS: a database for network-based drug-repositioning von Eichborn, Joachim Murgueitio, Manuela S. Dunkel, Mathias Koerner, Soeren Bourne, Philip E. Preissner, Robert Nucleic Acids Res Articles The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, the knowledge, understanding and prediction of so-called off-target effects allow a rational approach to the understanding of side-effects. With PROMISCUOUS we provide an exhaustive set of drugs (25 000), including withdrawn or experimental drugs, annotated with drug–protein and protein–protein relationships (21 500/104 000) compiled from public resources via text and data mining including manual curation. Measures of structural similarity for drugs as well as known side-effects can be easily connected to protein–protein interactions to establish and analyse networks responsible for multi-pharmacology. This network-based approach can provide a starting point for drug-repositioning. PROMISCUOUS is publicly available at http://bioinformatics.charite.de/promiscuous. Oxford University Press 2011-01 2010-11-10 /pmc/articles/PMC3013657/ /pubmed/21071407 http://dx.doi.org/10.1093/nar/gkq1037 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
von Eichborn, Joachim
Murgueitio, Manuela S.
Dunkel, Mathias
Koerner, Soeren
Bourne, Philip E.
Preissner, Robert
PROMISCUOUS: a database for network-based drug-repositioning
title PROMISCUOUS: a database for network-based drug-repositioning
title_full PROMISCUOUS: a database for network-based drug-repositioning
title_fullStr PROMISCUOUS: a database for network-based drug-repositioning
title_full_unstemmed PROMISCUOUS: a database for network-based drug-repositioning
title_short PROMISCUOUS: a database for network-based drug-repositioning
title_sort promiscuous: a database for network-based drug-repositioning
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013657/
https://www.ncbi.nlm.nih.gov/pubmed/21071407
http://dx.doi.org/10.1093/nar/gkq1037
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