Cargando…
PROMISCUOUS: a database for network-based drug-repositioning
The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, t...
Autores principales: | , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013657/ https://www.ncbi.nlm.nih.gov/pubmed/21071407 http://dx.doi.org/10.1093/nar/gkq1037 |
_version_ | 1782195297376534528 |
---|---|
author | von Eichborn, Joachim Murgueitio, Manuela S. Dunkel, Mathias Koerner, Soeren Bourne, Philip E. Preissner, Robert |
author_facet | von Eichborn, Joachim Murgueitio, Manuela S. Dunkel, Mathias Koerner, Soeren Bourne, Philip E. Preissner, Robert |
author_sort | von Eichborn, Joachim |
collection | PubMed |
description | The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, the knowledge, understanding and prediction of so-called off-target effects allow a rational approach to the understanding of side-effects. With PROMISCUOUS we provide an exhaustive set of drugs (25 000), including withdrawn or experimental drugs, annotated with drug–protein and protein–protein relationships (21 500/104 000) compiled from public resources via text and data mining including manual curation. Measures of structural similarity for drugs as well as known side-effects can be easily connected to protein–protein interactions to establish and analyse networks responsible for multi-pharmacology. This network-based approach can provide a starting point for drug-repositioning. PROMISCUOUS is publicly available at http://bioinformatics.charite.de/promiscuous. |
format | Text |
id | pubmed-3013657 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-30136572011-01-03 PROMISCUOUS: a database for network-based drug-repositioning von Eichborn, Joachim Murgueitio, Manuela S. Dunkel, Mathias Koerner, Soeren Bourne, Philip E. Preissner, Robert Nucleic Acids Res Articles The procedure of drug approval is time-consuming, costly and risky. Accidental findings regarding multi-specificity of approved drugs led to block-busters in new indication areas. Therefore, the interest in systematically elucidating new areas of application for known drugs is rising. Furthermore, the knowledge, understanding and prediction of so-called off-target effects allow a rational approach to the understanding of side-effects. With PROMISCUOUS we provide an exhaustive set of drugs (25 000), including withdrawn or experimental drugs, annotated with drug–protein and protein–protein relationships (21 500/104 000) compiled from public resources via text and data mining including manual curation. Measures of structural similarity for drugs as well as known side-effects can be easily connected to protein–protein interactions to establish and analyse networks responsible for multi-pharmacology. This network-based approach can provide a starting point for drug-repositioning. PROMISCUOUS is publicly available at http://bioinformatics.charite.de/promiscuous. Oxford University Press 2011-01 2010-11-10 /pmc/articles/PMC3013657/ /pubmed/21071407 http://dx.doi.org/10.1093/nar/gkq1037 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles von Eichborn, Joachim Murgueitio, Manuela S. Dunkel, Mathias Koerner, Soeren Bourne, Philip E. Preissner, Robert PROMISCUOUS: a database for network-based drug-repositioning |
title | PROMISCUOUS: a database for network-based drug-repositioning |
title_full | PROMISCUOUS: a database for network-based drug-repositioning |
title_fullStr | PROMISCUOUS: a database for network-based drug-repositioning |
title_full_unstemmed | PROMISCUOUS: a database for network-based drug-repositioning |
title_short | PROMISCUOUS: a database for network-based drug-repositioning |
title_sort | promiscuous: a database for network-based drug-repositioning |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013657/ https://www.ncbi.nlm.nih.gov/pubmed/21071407 http://dx.doi.org/10.1093/nar/gkq1037 |
work_keys_str_mv | AT voneichbornjoachim promiscuousadatabasefornetworkbaseddrugrepositioning AT murgueitiomanuelas promiscuousadatabasefornetworkbaseddrugrepositioning AT dunkelmathias promiscuousadatabasefornetworkbaseddrugrepositioning AT koernersoeren promiscuousadatabasefornetworkbaseddrugrepositioning AT bournephilipe promiscuousadatabasefornetworkbaseddrugrepositioning AT preissnerrobert promiscuousadatabasefornetworkbaseddrugrepositioning |