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Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins

The Laminin(LM)-database, hosted at http://www.lm.lncc.br, is the first database focusing a non-collagenous extracellular matrix protein family, the LMs. Part of the knowledge available in this website is automatically retrieved, whereas a significant amount of information is curated and annotated,...

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Autores principales: Golbert, Daiane C. F., Linhares-Lacerda, Leandra, Almeida, Luiz G., Correa-de-Santana, Eliane, de Oliveira, Alice R., Mundstein, Alex S., Savino, Wilson, de Vasconcelos, Ana T. R.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013663/
https://www.ncbi.nlm.nih.gov/pubmed/21087995
http://dx.doi.org/10.1093/nar/gkq1055
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author Golbert, Daiane C. F.
Linhares-Lacerda, Leandra
Almeida, Luiz G.
Correa-de-Santana, Eliane
de Oliveira, Alice R.
Mundstein, Alex S.
Savino, Wilson
de Vasconcelos, Ana T. R.
author_facet Golbert, Daiane C. F.
Linhares-Lacerda, Leandra
Almeida, Luiz G.
Correa-de-Santana, Eliane
de Oliveira, Alice R.
Mundstein, Alex S.
Savino, Wilson
de Vasconcelos, Ana T. R.
author_sort Golbert, Daiane C. F.
collection PubMed
description The Laminin(LM)-database, hosted at http://www.lm.lncc.br, is the first database focusing a non-collagenous extracellular matrix protein family, the LMs. Part of the knowledge available in this website is automatically retrieved, whereas a significant amount of information is curated and annotated, thus placing LM-database beyond a simple repository of data. In its home page, an overview of the rationale for the database is seen and readers can access a tutorial to facilitate navigation in the website, which in turn is presented with tabs subdivided into LMs, receptors, extracellular binding and other related proteins. Each tab opens into a given LM or LM-related molecule, where the reader finds a series of further tabs for ‘protein’, ‘gene structure’, ‘gene expression’ and ‘tissue distribution’ and ‘therapy’. Data are separated as a function of species, comprising Homo sapiens, Mus musculus and Rattus novergicus. Furthermore, there is specific tab displaying the LM nomenclatures. In another tab, a direct link to PubMed, which can be then consulted in a specific way, in terms of the biological functions of each molecule, knockout animals and genetic diseases, immune response and lymphomas/leukemias. LM-database will hopefully be a relevant tool for retrieving information concerning LMs in health and disease, particularly regarding the hemopoietic system.
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spelling pubmed-30136632011-01-03 Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins Golbert, Daiane C. F. Linhares-Lacerda, Leandra Almeida, Luiz G. Correa-de-Santana, Eliane de Oliveira, Alice R. Mundstein, Alex S. Savino, Wilson de Vasconcelos, Ana T. R. Nucleic Acids Res Articles The Laminin(LM)-database, hosted at http://www.lm.lncc.br, is the first database focusing a non-collagenous extracellular matrix protein family, the LMs. Part of the knowledge available in this website is automatically retrieved, whereas a significant amount of information is curated and annotated, thus placing LM-database beyond a simple repository of data. In its home page, an overview of the rationale for the database is seen and readers can access a tutorial to facilitate navigation in the website, which in turn is presented with tabs subdivided into LMs, receptors, extracellular binding and other related proteins. Each tab opens into a given LM or LM-related molecule, where the reader finds a series of further tabs for ‘protein’, ‘gene structure’, ‘gene expression’ and ‘tissue distribution’ and ‘therapy’. Data are separated as a function of species, comprising Homo sapiens, Mus musculus and Rattus novergicus. Furthermore, there is specific tab displaying the LM nomenclatures. In another tab, a direct link to PubMed, which can be then consulted in a specific way, in terms of the biological functions of each molecule, knockout animals and genetic diseases, immune response and lymphomas/leukemias. LM-database will hopefully be a relevant tool for retrieving information concerning LMs in health and disease, particularly regarding the hemopoietic system. Oxford University Press 2011-01 2010-11-17 /pmc/articles/PMC3013663/ /pubmed/21087995 http://dx.doi.org/10.1093/nar/gkq1055 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Golbert, Daiane C. F.
Linhares-Lacerda, Leandra
Almeida, Luiz G.
Correa-de-Santana, Eliane
de Oliveira, Alice R.
Mundstein, Alex S.
Savino, Wilson
de Vasconcelos, Ana T. R.
Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
title Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
title_full Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
title_fullStr Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
title_full_unstemmed Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
title_short Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
title_sort laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013663/
https://www.ncbi.nlm.nih.gov/pubmed/21087995
http://dx.doi.org/10.1093/nar/gkq1055
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