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Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins
The Laminin(LM)-database, hosted at http://www.lm.lncc.br, is the first database focusing a non-collagenous extracellular matrix protein family, the LMs. Part of the knowledge available in this website is automatically retrieved, whereas a significant amount of information is curated and annotated,...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Oxford University Press
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013663/ https://www.ncbi.nlm.nih.gov/pubmed/21087995 http://dx.doi.org/10.1093/nar/gkq1055 |
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author | Golbert, Daiane C. F. Linhares-Lacerda, Leandra Almeida, Luiz G. Correa-de-Santana, Eliane de Oliveira, Alice R. Mundstein, Alex S. Savino, Wilson de Vasconcelos, Ana T. R. |
author_facet | Golbert, Daiane C. F. Linhares-Lacerda, Leandra Almeida, Luiz G. Correa-de-Santana, Eliane de Oliveira, Alice R. Mundstein, Alex S. Savino, Wilson de Vasconcelos, Ana T. R. |
author_sort | Golbert, Daiane C. F. |
collection | PubMed |
description | The Laminin(LM)-database, hosted at http://www.lm.lncc.br, is the first database focusing a non-collagenous extracellular matrix protein family, the LMs. Part of the knowledge available in this website is automatically retrieved, whereas a significant amount of information is curated and annotated, thus placing LM-database beyond a simple repository of data. In its home page, an overview of the rationale for the database is seen and readers can access a tutorial to facilitate navigation in the website, which in turn is presented with tabs subdivided into LMs, receptors, extracellular binding and other related proteins. Each tab opens into a given LM or LM-related molecule, where the reader finds a series of further tabs for ‘protein’, ‘gene structure’, ‘gene expression’ and ‘tissue distribution’ and ‘therapy’. Data are separated as a function of species, comprising Homo sapiens, Mus musculus and Rattus novergicus. Furthermore, there is specific tab displaying the LM nomenclatures. In another tab, a direct link to PubMed, which can be then consulted in a specific way, in terms of the biological functions of each molecule, knockout animals and genetic diseases, immune response and lymphomas/leukemias. LM-database will hopefully be a relevant tool for retrieving information concerning LMs in health and disease, particularly regarding the hemopoietic system. |
format | Text |
id | pubmed-3013663 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-30136632011-01-03 Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins Golbert, Daiane C. F. Linhares-Lacerda, Leandra Almeida, Luiz G. Correa-de-Santana, Eliane de Oliveira, Alice R. Mundstein, Alex S. Savino, Wilson de Vasconcelos, Ana T. R. Nucleic Acids Res Articles The Laminin(LM)-database, hosted at http://www.lm.lncc.br, is the first database focusing a non-collagenous extracellular matrix protein family, the LMs. Part of the knowledge available in this website is automatically retrieved, whereas a significant amount of information is curated and annotated, thus placing LM-database beyond a simple repository of data. In its home page, an overview of the rationale for the database is seen and readers can access a tutorial to facilitate navigation in the website, which in turn is presented with tabs subdivided into LMs, receptors, extracellular binding and other related proteins. Each tab opens into a given LM or LM-related molecule, where the reader finds a series of further tabs for ‘protein’, ‘gene structure’, ‘gene expression’ and ‘tissue distribution’ and ‘therapy’. Data are separated as a function of species, comprising Homo sapiens, Mus musculus and Rattus novergicus. Furthermore, there is specific tab displaying the LM nomenclatures. In another tab, a direct link to PubMed, which can be then consulted in a specific way, in terms of the biological functions of each molecule, knockout animals and genetic diseases, immune response and lymphomas/leukemias. LM-database will hopefully be a relevant tool for retrieving information concerning LMs in health and disease, particularly regarding the hemopoietic system. Oxford University Press 2011-01 2010-11-17 /pmc/articles/PMC3013663/ /pubmed/21087995 http://dx.doi.org/10.1093/nar/gkq1055 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Golbert, Daiane C. F. Linhares-Lacerda, Leandra Almeida, Luiz G. Correa-de-Santana, Eliane de Oliveira, Alice R. Mundstein, Alex S. Savino, Wilson de Vasconcelos, Ana T. R. Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
title | Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
title_full | Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
title_fullStr | Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
title_full_unstemmed | Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
title_short | Laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
title_sort | laminin database: a tool to retrieve high-throughput and curated data for studies on laminins |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013663/ https://www.ncbi.nlm.nih.gov/pubmed/21087995 http://dx.doi.org/10.1093/nar/gkq1055 |
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