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PCRPi-DB: a database of computationally annotated hot spots in protein interfaces

Protein–protein interactions are central to almost any cellular process. Although typically protein interfaces are large, it is well established that only a relatively small region, the so-called ‘hot spot’, contributes the most to the total binding energy. There is a clear interest in identifying h...

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Detalles Bibliográficos
Autores principales: Segura, Joan, Fernandez-Fuentes, Narcis
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013674/
https://www.ncbi.nlm.nih.gov/pubmed/21097468
http://dx.doi.org/10.1093/nar/gkq1068
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author Segura, Joan
Fernandez-Fuentes, Narcis
author_facet Segura, Joan
Fernandez-Fuentes, Narcis
author_sort Segura, Joan
collection PubMed
description Protein–protein interactions are central to almost any cellular process. Although typically protein interfaces are large, it is well established that only a relatively small region, the so-called ‘hot spot’, contributes the most to the total binding energy. There is a clear interest in identifying hot spots because of its application in drug discovery and protein design. Presaging Critical Residues in Protein Interfaces Database (PCRPi-DB) is a public repository that archives computationally annotated hot spots in protein complexes for which the 3D structure is known. Hot spots have been annotated using a new and highly accurate computational method developed in the lab. PCRPi-DB is freely available to the scientific community at http://www.bioinsilico.org/PCRPIDB. Besides browsing and querying the contents of the database, extensive documentation and links to relevant on-line resources and contents are available to users. PCRPi-DB is updated on a weekly basis.
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spelling pubmed-30136742011-01-03 PCRPi-DB: a database of computationally annotated hot spots in protein interfaces Segura, Joan Fernandez-Fuentes, Narcis Nucleic Acids Res Articles Protein–protein interactions are central to almost any cellular process. Although typically protein interfaces are large, it is well established that only a relatively small region, the so-called ‘hot spot’, contributes the most to the total binding energy. There is a clear interest in identifying hot spots because of its application in drug discovery and protein design. Presaging Critical Residues in Protein Interfaces Database (PCRPi-DB) is a public repository that archives computationally annotated hot spots in protein complexes for which the 3D structure is known. Hot spots have been annotated using a new and highly accurate computational method developed in the lab. PCRPi-DB is freely available to the scientific community at http://www.bioinsilico.org/PCRPIDB. Besides browsing and querying the contents of the database, extensive documentation and links to relevant on-line resources and contents are available to users. PCRPi-DB is updated on a weekly basis. Oxford University Press 2011-01 2010-11-18 /pmc/articles/PMC3013674/ /pubmed/21097468 http://dx.doi.org/10.1093/nar/gkq1068 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Segura, Joan
Fernandez-Fuentes, Narcis
PCRPi-DB: a database of computationally annotated hot spots in protein interfaces
title PCRPi-DB: a database of computationally annotated hot spots in protein interfaces
title_full PCRPi-DB: a database of computationally annotated hot spots in protein interfaces
title_fullStr PCRPi-DB: a database of computationally annotated hot spots in protein interfaces
title_full_unstemmed PCRPi-DB: a database of computationally annotated hot spots in protein interfaces
title_short PCRPi-DB: a database of computationally annotated hot spots in protein interfaces
title_sort pcrpi-db: a database of computationally annotated hot spots in protein interfaces
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013674/
https://www.ncbi.nlm.nih.gov/pubmed/21097468
http://dx.doi.org/10.1093/nar/gkq1068
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