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ZFIN: enhancements and updates to the zebrafish model organism database
ZFIN, the Zebrafish Model Organism Database, http://zfin.org, serves as the central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. ZFIN manually curates comprehensive data for zebrafish genes, phenotypes, genotypes, gene expression, antibodies, a...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2011
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013679/ https://www.ncbi.nlm.nih.gov/pubmed/21036866 http://dx.doi.org/10.1093/nar/gkq1077 |
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author | Bradford, Yvonne Conlin, Tom Dunn, Nathan Fashena, David Frazer, Ken Howe, Douglas G. Knight, Jonathan Mani, Prita Martin, Ryan Moxon, Sierra A. T. Paddock, Holly Pich, Christian Ramachandran, Sridhar Ruef, Barbara J. Ruzicka, Leyla Bauer Schaper, Holle Schaper, Kevin Shao, Xiang Singer, Amy Sprague, Judy Sprunger, Brock Van Slyke, Ceri Westerfield, Monte |
author_facet | Bradford, Yvonne Conlin, Tom Dunn, Nathan Fashena, David Frazer, Ken Howe, Douglas G. Knight, Jonathan Mani, Prita Martin, Ryan Moxon, Sierra A. T. Paddock, Holly Pich, Christian Ramachandran, Sridhar Ruef, Barbara J. Ruzicka, Leyla Bauer Schaper, Holle Schaper, Kevin Shao, Xiang Singer, Amy Sprague, Judy Sprunger, Brock Van Slyke, Ceri Westerfield, Monte |
author_sort | Bradford, Yvonne |
collection | PubMed |
description | ZFIN, the Zebrafish Model Organism Database, http://zfin.org, serves as the central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. ZFIN manually curates comprehensive data for zebrafish genes, phenotypes, genotypes, gene expression, antibodies, anatomical structures and publications. A wide-ranging collection of web-based search forms and tools facilitates access to integrated views of these data promoting analysis and scientific discovery. Data represented in ZFIN are derived from three primary sources: curation of zebrafish publications, individual research laboratories and collaborations with bioinformatics organizations. Data formats include text, images and graphical representations. ZFIN is a dynamic resource with data added daily as part of our ongoing curation process. Software updates are frequent. Here, we describe recent additions to ZFIN including (i) enhanced access to images, (ii) genomic features, (iii) genome browser, (iv) transcripts, (v) antibodies and (vi) a community wiki for protocols and antibodies. |
format | Text |
id | pubmed-3013679 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-30136792011-01-03 ZFIN: enhancements and updates to the zebrafish model organism database Bradford, Yvonne Conlin, Tom Dunn, Nathan Fashena, David Frazer, Ken Howe, Douglas G. Knight, Jonathan Mani, Prita Martin, Ryan Moxon, Sierra A. T. Paddock, Holly Pich, Christian Ramachandran, Sridhar Ruef, Barbara J. Ruzicka, Leyla Bauer Schaper, Holle Schaper, Kevin Shao, Xiang Singer, Amy Sprague, Judy Sprunger, Brock Van Slyke, Ceri Westerfield, Monte Nucleic Acids Res Articles ZFIN, the Zebrafish Model Organism Database, http://zfin.org, serves as the central repository and web-based resource for zebrafish genetic, genomic, phenotypic and developmental data. ZFIN manually curates comprehensive data for zebrafish genes, phenotypes, genotypes, gene expression, antibodies, anatomical structures and publications. A wide-ranging collection of web-based search forms and tools facilitates access to integrated views of these data promoting analysis and scientific discovery. Data represented in ZFIN are derived from three primary sources: curation of zebrafish publications, individual research laboratories and collaborations with bioinformatics organizations. Data formats include text, images and graphical representations. ZFIN is a dynamic resource with data added daily as part of our ongoing curation process. Software updates are frequent. Here, we describe recent additions to ZFIN including (i) enhanced access to images, (ii) genomic features, (iii) genome browser, (iv) transcripts, (v) antibodies and (vi) a community wiki for protocols and antibodies. Oxford University Press 2011-01 2010-10-29 /pmc/articles/PMC3013679/ /pubmed/21036866 http://dx.doi.org/10.1093/nar/gkq1077 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Bradford, Yvonne Conlin, Tom Dunn, Nathan Fashena, David Frazer, Ken Howe, Douglas G. Knight, Jonathan Mani, Prita Martin, Ryan Moxon, Sierra A. T. Paddock, Holly Pich, Christian Ramachandran, Sridhar Ruef, Barbara J. Ruzicka, Leyla Bauer Schaper, Holle Schaper, Kevin Shao, Xiang Singer, Amy Sprague, Judy Sprunger, Brock Van Slyke, Ceri Westerfield, Monte ZFIN: enhancements and updates to the zebrafish model organism database |
title | ZFIN: enhancements and updates to the zebrafish model organism database |
title_full | ZFIN: enhancements and updates to the zebrafish model organism database |
title_fullStr | ZFIN: enhancements and updates to the zebrafish model organism database |
title_full_unstemmed | ZFIN: enhancements and updates to the zebrafish model organism database |
title_short | ZFIN: enhancements and updates to the zebrafish model organism database |
title_sort | zfin: enhancements and updates to the zebrafish model organism database |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013679/ https://www.ncbi.nlm.nih.gov/pubmed/21036866 http://dx.doi.org/10.1093/nar/gkq1077 |
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