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The International Nucleotide Sequence Database Collaboration

Under the International Nucleotide Sequence Database Collaboration (INSDC; http://www.insdc.org), globally comprehensive public domain nucleotide sequence is captured, preserved and presented. The partners of this long-standing collaboration work closely together to provide data formats and conventi...

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Detalles Bibliográficos
Autores principales: Cochrane, Guy, Karsch-Mizrachi, Ilene, Nakamura, Yasukazu
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013722/
https://www.ncbi.nlm.nih.gov/pubmed/21106499
http://dx.doi.org/10.1093/nar/gkq1150
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author Cochrane, Guy
Karsch-Mizrachi, Ilene
Nakamura, Yasukazu
author_facet Cochrane, Guy
Karsch-Mizrachi, Ilene
Nakamura, Yasukazu
author_sort Cochrane, Guy
collection PubMed
description Under the International Nucleotide Sequence Database Collaboration (INSDC; http://www.insdc.org), globally comprehensive public domain nucleotide sequence is captured, preserved and presented. The partners of this long-standing collaboration work closely together to provide data formats and conventions that enable consistent data submission to their databases and support regular data exchange around the globe. Clearly defined policy and governance in relation to free access to data and relationships with journal publishers have positioned INSDC databases as a key provider of the scientific record and a core foundation for the global bioinformatics data infrastructure. While growth in sequence data volumes comes no longer as a surprise to INSDC partners, the uptake of next-generation sequencing technology by mainstream science that we have witnessed in recent years brings a step-change to growth, necessarily making a clear mark on INSDC strategy. In this article, we introduce the INSDC, outline data growth patterns and comment on the challenges of increased growth.
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spelling pubmed-30137222011-01-03 The International Nucleotide Sequence Database Collaboration Cochrane, Guy Karsch-Mizrachi, Ilene Nakamura, Yasukazu Nucleic Acids Res Articles Under the International Nucleotide Sequence Database Collaboration (INSDC; http://www.insdc.org), globally comprehensive public domain nucleotide sequence is captured, preserved and presented. The partners of this long-standing collaboration work closely together to provide data formats and conventions that enable consistent data submission to their databases and support regular data exchange around the globe. Clearly defined policy and governance in relation to free access to data and relationships with journal publishers have positioned INSDC databases as a key provider of the scientific record and a core foundation for the global bioinformatics data infrastructure. While growth in sequence data volumes comes no longer as a surprise to INSDC partners, the uptake of next-generation sequencing technology by mainstream science that we have witnessed in recent years brings a step-change to growth, necessarily making a clear mark on INSDC strategy. In this article, we introduce the INSDC, outline data growth patterns and comment on the challenges of increased growth. Oxford University Press 2011-01 2010-11-23 /pmc/articles/PMC3013722/ /pubmed/21106499 http://dx.doi.org/10.1093/nar/gkq1150 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Cochrane, Guy
Karsch-Mizrachi, Ilene
Nakamura, Yasukazu
The International Nucleotide Sequence Database Collaboration
title The International Nucleotide Sequence Database Collaboration
title_full The International Nucleotide Sequence Database Collaboration
title_fullStr The International Nucleotide Sequence Database Collaboration
title_full_unstemmed The International Nucleotide Sequence Database Collaboration
title_short The International Nucleotide Sequence Database Collaboration
title_sort international nucleotide sequence database collaboration
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013722/
https://www.ncbi.nlm.nih.gov/pubmed/21106499
http://dx.doi.org/10.1093/nar/gkq1150
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