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Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 10(2 )DNA copies/μL, and the assay was linear in the range of 1...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2010
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3014914/ https://www.ncbi.nlm.nih.gov/pubmed/21126330 http://dx.doi.org/10.1186/1743-422X-7-353 |
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author | Song, Cuiping Zhu, Chao Zhang, Chaofan Cui, Shangjin |
author_facet | Song, Cuiping Zhu, Chao Zhang, Chaofan Cui, Shangjin |
author_sort | Song, Cuiping |
collection | PubMed |
description | A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 10(2 )DNA copies/μL, and the assay was linear in the range of 1 × 10(2 )to 1 × 10(9 )copies/μL. There was no cross-reaction with porcine circovirus 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), classical swine fever virus (CSFV), or Japanese encephalitis virus (JEV). The assay was specific and reproducible. In 41 clinical samples, PPV was detected in 32 samples with the real-time PCR assay and in only 11 samples with a conventional PCR assay. The real-time assay using the TaqMan-system can therefore be practically used for studying the epidemiology and management of PPV. |
format | Text |
id | pubmed-3014914 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-30149142011-01-05 Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene Song, Cuiping Zhu, Chao Zhang, Chaofan Cui, Shangjin Virol J Short Report A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 10(2 )DNA copies/μL, and the assay was linear in the range of 1 × 10(2 )to 1 × 10(9 )copies/μL. There was no cross-reaction with porcine circovirus 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), classical swine fever virus (CSFV), or Japanese encephalitis virus (JEV). The assay was specific and reproducible. In 41 clinical samples, PPV was detected in 32 samples with the real-time PCR assay and in only 11 samples with a conventional PCR assay. The real-time assay using the TaqMan-system can therefore be practically used for studying the epidemiology and management of PPV. BioMed Central 2010-12-02 /pmc/articles/PMC3014914/ /pubmed/21126330 http://dx.doi.org/10.1186/1743-422X-7-353 Text en Copyright ©2010 Song et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<url>http://creativecommons.org/licenses/by/2.0</url>), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Report Song, Cuiping Zhu, Chao Zhang, Chaofan Cui, Shangjin Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene |
title | Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene |
title_full | Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene |
title_fullStr | Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene |
title_full_unstemmed | Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene |
title_short | Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene |
title_sort | detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the ns1 gene |
topic | Short Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3014914/ https://www.ncbi.nlm.nih.gov/pubmed/21126330 http://dx.doi.org/10.1186/1743-422X-7-353 |
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