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Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene

A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 10(2 )DNA copies/μL, and the assay was linear in the range of 1...

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Detalles Bibliográficos
Autores principales: Song, Cuiping, Zhu, Chao, Zhang, Chaofan, Cui, Shangjin
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3014914/
https://www.ncbi.nlm.nih.gov/pubmed/21126330
http://dx.doi.org/10.1186/1743-422X-7-353
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author Song, Cuiping
Zhu, Chao
Zhang, Chaofan
Cui, Shangjin
author_facet Song, Cuiping
Zhu, Chao
Zhang, Chaofan
Cui, Shangjin
author_sort Song, Cuiping
collection PubMed
description A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 10(2 )DNA copies/μL, and the assay was linear in the range of 1 × 10(2 )to 1 × 10(9 )copies/μL. There was no cross-reaction with porcine circovirus 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), classical swine fever virus (CSFV), or Japanese encephalitis virus (JEV). The assay was specific and reproducible. In 41 clinical samples, PPV was detected in 32 samples with the real-time PCR assay and in only 11 samples with a conventional PCR assay. The real-time assay using the TaqMan-system can therefore be practically used for studying the epidemiology and management of PPV.
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spelling pubmed-30149142011-01-05 Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene Song, Cuiping Zhu, Chao Zhang, Chaofan Cui, Shangjin Virol J Short Report A TaqMan-based real-time polymerase chain reaction (PCR) assay was devised for the detection of porcine parvovirus (PPV). Two primers and a TaqMan probe for the non-structural protein NS1 gene were designed. The detection limit was 1 × 10(2 )DNA copies/μL, and the assay was linear in the range of 1 × 10(2 )to 1 × 10(9 )copies/μL. There was no cross-reaction with porcine circovirus 2 (PCV2), porcine reproductive and respiratory syndrome virus (PRRSV), pseudorabies virus (PRV), classical swine fever virus (CSFV), or Japanese encephalitis virus (JEV). The assay was specific and reproducible. In 41 clinical samples, PPV was detected in 32 samples with the real-time PCR assay and in only 11 samples with a conventional PCR assay. The real-time assay using the TaqMan-system can therefore be practically used for studying the epidemiology and management of PPV. BioMed Central 2010-12-02 /pmc/articles/PMC3014914/ /pubmed/21126330 http://dx.doi.org/10.1186/1743-422X-7-353 Text en Copyright ©2010 Song et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<url>http://creativecommons.org/licenses/by/2.0</url>), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Report
Song, Cuiping
Zhu, Chao
Zhang, Chaofan
Cui, Shangjin
Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
title Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
title_full Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
title_fullStr Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
title_full_unstemmed Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
title_short Detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the NS1 gene
title_sort detection of porcine parvovirus using a taqman-based real-time pcr with primers and probe designed for the ns1 gene
topic Short Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3014914/
https://www.ncbi.nlm.nih.gov/pubmed/21126330
http://dx.doi.org/10.1186/1743-422X-7-353
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