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Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties
Reconstruction algorithms are presented for a two-step solution of the bioluminescence tomography (BLT) problem. In the first step, a priori anatomical information provided by x-ray computed tomography or by other methods is used to solve the continuous wave (cw) diffuse optical tomography (DOT) pro...
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Formato: | Texto |
Lenguaje: | English |
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Optical Society of America
2010
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3017985/ https://www.ncbi.nlm.nih.gov/pubmed/21258486 http://dx.doi.org/10.1364/BOE.1.000512 |
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author | Naser, Mohamed A. Patterson, Michael S. |
author_facet | Naser, Mohamed A. Patterson, Michael S. |
author_sort | Naser, Mohamed A. |
collection | PubMed |
description | Reconstruction algorithms are presented for a two-step solution of the bioluminescence tomography (BLT) problem. In the first step, a priori anatomical information provided by x-ray computed tomography or by other methods is used to solve the continuous wave (cw) diffuse optical tomography (DOT) problem. A Taylor series expansion approximates the light fluence rate dependence on the optical properties of each region where first and second order direct derivatives of the light fluence rate with respect to scattering and absorption coefficients are obtained and used for the reconstruction. In the second step, the reconstructed optical properties at different wavelengths are used to calculate the Green’s function of the system. Then an iterative minimization solution based on the L1 norm shrinks the permissible regions where the sources are allowed by selecting points with higher probability to contribute to the source distribution. This provides an efficient BLT reconstruction algorithm with the ability to determine relative source magnitudes and positions in the presence of noise. |
format | Text |
id | pubmed-3017985 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2010 |
publisher | Optical Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-30179852011-01-21 Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties Naser, Mohamed A. Patterson, Michael S. Biomed Opt Express Image Reconstruction and Inverse Problems Reconstruction algorithms are presented for a two-step solution of the bioluminescence tomography (BLT) problem. In the first step, a priori anatomical information provided by x-ray computed tomography or by other methods is used to solve the continuous wave (cw) diffuse optical tomography (DOT) problem. A Taylor series expansion approximates the light fluence rate dependence on the optical properties of each region where first and second order direct derivatives of the light fluence rate with respect to scattering and absorption coefficients are obtained and used for the reconstruction. In the second step, the reconstructed optical properties at different wavelengths are used to calculate the Green’s function of the system. Then an iterative minimization solution based on the L1 norm shrinks the permissible regions where the sources are allowed by selecting points with higher probability to contribute to the source distribution. This provides an efficient BLT reconstruction algorithm with the ability to determine relative source magnitudes and positions in the presence of noise. Optical Society of America 2010-08-05 /pmc/articles/PMC3017985/ /pubmed/21258486 http://dx.doi.org/10.1364/BOE.1.000512 Text en ©2010 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially. |
spellingShingle | Image Reconstruction and Inverse Problems Naser, Mohamed A. Patterson, Michael S. Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
title | Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
title_full | Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
title_fullStr | Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
title_full_unstemmed | Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
title_short | Algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
title_sort | algorithms for bioluminescence tomography incorporating anatomical information and reconstruction of tissue optical properties |
topic | Image Reconstruction and Inverse Problems |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3017985/ https://www.ncbi.nlm.nih.gov/pubmed/21258486 http://dx.doi.org/10.1364/BOE.1.000512 |
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