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A Bayesian method for single molecule, fluorescence burst analysis

There is currently great interest in determining physical parameters, e.g. fluorescence lifetime, of individual molecules that inform on environmental conditions, whilst avoiding the artefacts of ensemble averaging. Protein interactions, molecular dynamics and sub-species can all be studied. In a bu...

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Detalles Bibliográficos
Autores principales: Barber, P. R., Ameer-Beg, S. M., Pathmananthan, S., Rowley, M., Coolen, A. C. C.
Formato: Texto
Lenguaje:English
Publicado: Optical Society of America 2010
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3018088/
https://www.ncbi.nlm.nih.gov/pubmed/21258537
http://dx.doi.org/10.1364/BOE.1.001148
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author Barber, P. R.
Ameer-Beg, S. M.
Pathmananthan, S.
Rowley, M.
Coolen, A. C. C.
author_facet Barber, P. R.
Ameer-Beg, S. M.
Pathmananthan, S.
Rowley, M.
Coolen, A. C. C.
author_sort Barber, P. R.
collection PubMed
description There is currently great interest in determining physical parameters, e.g. fluorescence lifetime, of individual molecules that inform on environmental conditions, whilst avoiding the artefacts of ensemble averaging. Protein interactions, molecular dynamics and sub-species can all be studied. In a burst integrated fluorescence lifetime (BIFL) experiment, identification of fluorescent bursts from single molecules above background detection is a problem. This paper presents a Bayesian method for burst identification based on model selection and demonstrates the detection of bursts consisting of 10% signal amplitude. The method also estimates the fluorescence lifetime (and its error) from the burst data.
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spelling pubmed-30180882011-01-21 A Bayesian method for single molecule, fluorescence burst analysis Barber, P. R. Ameer-Beg, S. M. Pathmananthan, S. Rowley, M. Coolen, A. C. C. Biomed Opt Express Optical Biophysics There is currently great interest in determining physical parameters, e.g. fluorescence lifetime, of individual molecules that inform on environmental conditions, whilst avoiding the artefacts of ensemble averaging. Protein interactions, molecular dynamics and sub-species can all be studied. In a burst integrated fluorescence lifetime (BIFL) experiment, identification of fluorescent bursts from single molecules above background detection is a problem. This paper presents a Bayesian method for burst identification based on model selection and demonstrates the detection of bursts consisting of 10% signal amplitude. The method also estimates the fluorescence lifetime (and its error) from the burst data. Optical Society of America 2010-10-12 /pmc/articles/PMC3018088/ /pubmed/21258537 http://dx.doi.org/10.1364/BOE.1.001148 Text en ©2010 Optical Society of America http://creativecommons.org/licenses/by-nc-nd/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License, which permits download and redistribution, provided that the original work is properly cited. This license restricts the article from being modified or used commercially.
spellingShingle Optical Biophysics
Barber, P. R.
Ameer-Beg, S. M.
Pathmananthan, S.
Rowley, M.
Coolen, A. C. C.
A Bayesian method for single molecule, fluorescence burst analysis
title A Bayesian method for single molecule, fluorescence burst analysis
title_full A Bayesian method for single molecule, fluorescence burst analysis
title_fullStr A Bayesian method for single molecule, fluorescence burst analysis
title_full_unstemmed A Bayesian method for single molecule, fluorescence burst analysis
title_short A Bayesian method for single molecule, fluorescence burst analysis
title_sort bayesian method for single molecule, fluorescence burst analysis
topic Optical Biophysics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3018088/
https://www.ncbi.nlm.nih.gov/pubmed/21258537
http://dx.doi.org/10.1364/BOE.1.001148
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