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From Spiking Neuron Models to Linear-Nonlinear Models
Neurons transform time-varying inputs into action potentials emitted stochastically at a time dependent rate. The mapping from current input to output firing rate is often represented with the help of phenomenological models such as the linear-nonlinear (LN) cascade, in which the output firing rate...
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Formato: | Texto |
Lenguaje: | English |
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Public Library of Science
2011
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3024256/ https://www.ncbi.nlm.nih.gov/pubmed/21283777 http://dx.doi.org/10.1371/journal.pcbi.1001056 |
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author | Ostojic, Srdjan Brunel, Nicolas |
author_facet | Ostojic, Srdjan Brunel, Nicolas |
author_sort | Ostojic, Srdjan |
collection | PubMed |
description | Neurons transform time-varying inputs into action potentials emitted stochastically at a time dependent rate. The mapping from current input to output firing rate is often represented with the help of phenomenological models such as the linear-nonlinear (LN) cascade, in which the output firing rate is estimated by applying to the input successively a linear temporal filter and a static non-linear transformation. These simplified models leave out the biophysical details of action potential generation. It is not a priori clear to which extent the input-output mapping of biophysically more realistic, spiking neuron models can be reduced to a simple linear-nonlinear cascade. Here we investigate this question for the leaky integrate-and-fire (LIF), exponential integrate-and-fire (EIF) and conductance-based Wang-Buzsáki models in presence of background synaptic activity. We exploit available analytic results for these models to determine the corresponding linear filter and static non-linearity in a parameter-free form. We show that the obtained functions are identical to the linear filter and static non-linearity determined using standard reverse correlation analysis. We then quantitatively compare the output of the corresponding linear-nonlinear cascade with numerical simulations of spiking neurons, systematically varying the parameters of input signal and background noise. We find that the LN cascade provides accurate estimates of the firing rates of spiking neurons in most of parameter space. For the EIF and Wang-Buzsáki models, we show that the LN cascade can be reduced to a firing rate model, the timescale of which we determine analytically. Finally we introduce an adaptive timescale rate model in which the timescale of the linear filter depends on the instantaneous firing rate. This model leads to highly accurate estimates of instantaneous firing rates. |
format | Text |
id | pubmed-3024256 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2011 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-30242562011-01-31 From Spiking Neuron Models to Linear-Nonlinear Models Ostojic, Srdjan Brunel, Nicolas PLoS Comput Biol Research Article Neurons transform time-varying inputs into action potentials emitted stochastically at a time dependent rate. The mapping from current input to output firing rate is often represented with the help of phenomenological models such as the linear-nonlinear (LN) cascade, in which the output firing rate is estimated by applying to the input successively a linear temporal filter and a static non-linear transformation. These simplified models leave out the biophysical details of action potential generation. It is not a priori clear to which extent the input-output mapping of biophysically more realistic, spiking neuron models can be reduced to a simple linear-nonlinear cascade. Here we investigate this question for the leaky integrate-and-fire (LIF), exponential integrate-and-fire (EIF) and conductance-based Wang-Buzsáki models in presence of background synaptic activity. We exploit available analytic results for these models to determine the corresponding linear filter and static non-linearity in a parameter-free form. We show that the obtained functions are identical to the linear filter and static non-linearity determined using standard reverse correlation analysis. We then quantitatively compare the output of the corresponding linear-nonlinear cascade with numerical simulations of spiking neurons, systematically varying the parameters of input signal and background noise. We find that the LN cascade provides accurate estimates of the firing rates of spiking neurons in most of parameter space. For the EIF and Wang-Buzsáki models, we show that the LN cascade can be reduced to a firing rate model, the timescale of which we determine analytically. Finally we introduce an adaptive timescale rate model in which the timescale of the linear filter depends on the instantaneous firing rate. This model leads to highly accurate estimates of instantaneous firing rates. Public Library of Science 2011-01-20 /pmc/articles/PMC3024256/ /pubmed/21283777 http://dx.doi.org/10.1371/journal.pcbi.1001056 Text en Ostojic, Brunel. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited. |
spellingShingle | Research Article Ostojic, Srdjan Brunel, Nicolas From Spiking Neuron Models to Linear-Nonlinear Models |
title | From Spiking Neuron Models to Linear-Nonlinear Models |
title_full | From Spiking Neuron Models to Linear-Nonlinear Models |
title_fullStr | From Spiking Neuron Models to Linear-Nonlinear Models |
title_full_unstemmed | From Spiking Neuron Models to Linear-Nonlinear Models |
title_short | From Spiking Neuron Models to Linear-Nonlinear Models |
title_sort | from spiking neuron models to linear-nonlinear models |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3024256/ https://www.ncbi.nlm.nih.gov/pubmed/21283777 http://dx.doi.org/10.1371/journal.pcbi.1001056 |
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