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DNA is a co-factor for its own replication in Xenopus egg extracts

Soluble Xenopus egg extracts efficiently replicate added plasmids using a physiological mechanism, and thus represent a powerful system to understand vertebrate DNA replication. Surprisingly, DNA replication in this system is highly sensitive to plasmid concentration, being undetectable below ∼10 pM...

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Detalles Bibliográficos
Autores principales: Lebofsky, Ronald, van Oijen, Antoine M., Walter, Johannes C.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2011
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3025559/
https://www.ncbi.nlm.nih.gov/pubmed/20861001
http://dx.doi.org/10.1093/nar/gkq739
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author Lebofsky, Ronald
van Oijen, Antoine M.
Walter, Johannes C.
author_facet Lebofsky, Ronald
van Oijen, Antoine M.
Walter, Johannes C.
author_sort Lebofsky, Ronald
collection PubMed
description Soluble Xenopus egg extracts efficiently replicate added plasmids using a physiological mechanism, and thus represent a powerful system to understand vertebrate DNA replication. Surprisingly, DNA replication in this system is highly sensitive to plasmid concentration, being undetectable below ∼10 pM and highly efficient above ∼75 pM. DNA replication at the high plasmid concentration does not require plasmid–plasmid contacts, since replication is not inhibited when plasmids are immobilized in agarose prior to addition of egg extract. The absence of replication at low plasmid concentration is due to a defect in the assembly of pre-replication complexes (pre-RCs). pre-RC assembly requires contact-independent communication between plasmids. Our results show that in Xenopus egg extracts, aggregation of multiple replication forks is not required for efficient replication of plasmid DNA, and they suggest that DNA functions as a co-factor for its own duplication.
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spelling pubmed-30255592011-01-24 DNA is a co-factor for its own replication in Xenopus egg extracts Lebofsky, Ronald van Oijen, Antoine M. Walter, Johannes C. Nucleic Acids Res Genome Integrity, Repair and Replication Soluble Xenopus egg extracts efficiently replicate added plasmids using a physiological mechanism, and thus represent a powerful system to understand vertebrate DNA replication. Surprisingly, DNA replication in this system is highly sensitive to plasmid concentration, being undetectable below ∼10 pM and highly efficient above ∼75 pM. DNA replication at the high plasmid concentration does not require plasmid–plasmid contacts, since replication is not inhibited when plasmids are immobilized in agarose prior to addition of egg extract. The absence of replication at low plasmid concentration is due to a defect in the assembly of pre-replication complexes (pre-RCs). pre-RC assembly requires contact-independent communication between plasmids. Our results show that in Xenopus egg extracts, aggregation of multiple replication forks is not required for efficient replication of plasmid DNA, and they suggest that DNA functions as a co-factor for its own duplication. Oxford University Press 2011-01 2010-09-21 /pmc/articles/PMC3025559/ /pubmed/20861001 http://dx.doi.org/10.1093/nar/gkq739 Text en © The Author(s) 2010. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/2.5 This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.5), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Genome Integrity, Repair and Replication
Lebofsky, Ronald
van Oijen, Antoine M.
Walter, Johannes C.
DNA is a co-factor for its own replication in Xenopus egg extracts
title DNA is a co-factor for its own replication in Xenopus egg extracts
title_full DNA is a co-factor for its own replication in Xenopus egg extracts
title_fullStr DNA is a co-factor for its own replication in Xenopus egg extracts
title_full_unstemmed DNA is a co-factor for its own replication in Xenopus egg extracts
title_short DNA is a co-factor for its own replication in Xenopus egg extracts
title_sort dna is a co-factor for its own replication in xenopus egg extracts
topic Genome Integrity, Repair and Replication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3025559/
https://www.ncbi.nlm.nih.gov/pubmed/20861001
http://dx.doi.org/10.1093/nar/gkq739
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