Cargando…
SAMMate: a GUI tool for processing short read alignments in SAM/BAM format
BACKGROUND: Next Generation Sequencing (NGS) technology generates tens of millions of short reads for each DNA/RNA sample. A key step in NGS data analysis is the short read alignment of the generated sequences to a reference genome. Although storing alignment information in the Sequence Alignment/Ma...
Autores principales: | Xu, Guorong, Deng, Nan, Zhao, Zhiyu, Judeh, Thair, Flemington, Erik, Zhu, Dongxiao |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3027120/ https://www.ncbi.nlm.nih.gov/pubmed/21232146 http://dx.doi.org/10.1186/1751-0473-6-2 |
Ejemplares similares
-
SamQL: a structured query language and filtering tool for the SAM/BAM file format
por: Lee, Christopher T., et al.
Publicado: (2021) -
Geno viewer, a SAM/BAM viewer tool
por: Laczik, Miklós, et al.
Publicado: (2012) -
BAMQL: a query language for extracting reads from BAM files
por: Masella, Andre P., et al.
Publicado: (2016) -
Alview: Portable Software for Viewing Sequence Reads in BAM Formatted Files
por: Finney, Richard P, et al.
Publicado: (2015) -
Simultaneous alignment of short reads against multiple genomes
por: Schneeberger, Korbinian, et al.
Publicado: (2009)