Cargando…
Shape-based peak identification for ChIP-Seq
BACKGROUND: The identification of binding targets for proteins using ChIP-Seq has gained popularity as an alternative to ChIP-chip. Sequencing can, in principle, eliminate artifacts associated with microarrays, and cheap sequencing offers the ability to sequence deeply and obtain a comprehensive sur...
Autores principales: | Hower, Valerie, Evans, Steven N, Pachter, Lior |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2011
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3032669/ https://www.ncbi.nlm.nih.gov/pubmed/21226895 http://dx.doi.org/10.1186/1471-2105-12-15 |
Ejemplares similares
-
The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding
por: Kornacker, Karl, et al.
Publicado: (2012) -
NEXT-peak: a normal-exponential two-peak model for peak-calling in ChIP-seq data
por: Kim, Nak-Kyeong, et al.
Publicado: (2013) -
Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks
por: Nix, David A, et al.
Publicado: (2008) -
MMDiff: quantitative testing for shape changes in ChIP-Seq data sets
por: Schweikert, Gabriele, et al.
Publicado: (2013) -
ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene ranking
por: Wu, George, et al.
Publicado: (2013)