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Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))

Brachybacterium faecium Collins et al. 1988 is the type species of the genus, and is of phylogenetic interest because of its location in the Dermabacteraceae, a rather isolated family within the actinobacterial suborder Micrococcineae. B. faecium is known for its rod-coccus growth cycle and the abil...

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Autores principales: Lapidus, Alla, Pukall, Rüdiger, LaButtii, Kurt, Copeland, Alex, Del Rio, Tijana Glavina, Nolan, Matt, Chen, Feng, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Rohde, Manfred, Göker, Markus, Pati, Amrita, Ivanova, Natalia, Mavrommatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, D'haeseleer, Patrik, Chain, Patrick, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035206/
https://www.ncbi.nlm.nih.gov/pubmed/21304631
http://dx.doi.org/10.4056/sigs.492
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author Lapidus, Alla
Pukall, Rüdiger
LaButtii, Kurt
Copeland, Alex
Del Rio, Tijana Glavina
Nolan, Matt
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Rohde, Manfred
Göker, Markus
Pati, Amrita
Ivanova, Natalia
Mavrommatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
D'haeseleer, Patrik
Chain, Patrick
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Lapidus, Alla
Pukall, Rüdiger
LaButtii, Kurt
Copeland, Alex
Del Rio, Tijana Glavina
Nolan, Matt
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Rohde, Manfred
Göker, Markus
Pati, Amrita
Ivanova, Natalia
Mavrommatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
D'haeseleer, Patrik
Chain, Patrick
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Lapidus, Alla
collection PubMed
description Brachybacterium faecium Collins et al. 1988 is the type species of the genus, and is of phylogenetic interest because of its location in the Dermabacteraceae, a rather isolated family within the actinobacterial suborder Micrococcineae. B. faecium is known for its rod-coccus growth cycle and the ability to degrade uric acid. It grows aerobically or weakly anaerobically. The strain described in this report is a free-living, nonmotile, Gram-positive bacterium, originally isolated from poultry deep litter. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the actinobacterial family Dermabacteraceae, and the 3,614,992 bp long single replicon genome with its 3129 protein-coding and 69 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352062011-02-08 Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T)) Lapidus, Alla Pukall, Rüdiger LaButtii, Kurt Copeland, Alex Del Rio, Tijana Glavina Nolan, Matt Chen, Feng Lucas, Susan Tice, Hope Cheng, Jan-Fang Bruce, David Goodwin, Lynne Pitluck, Sam Rohde, Manfred Göker, Markus Pati, Amrita Ivanova, Natalia Mavrommatis, Konstantinos Chen, Amy Palaniappan, Krishna D'haeseleer, Patrik Chain, Patrick Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Brachybacterium faecium Collins et al. 1988 is the type species of the genus, and is of phylogenetic interest because of its location in the Dermabacteraceae, a rather isolated family within the actinobacterial suborder Micrococcineae. B. faecium is known for its rod-coccus growth cycle and the ability to degrade uric acid. It grows aerobically or weakly anaerobically. The strain described in this report is a free-living, nonmotile, Gram-positive bacterium, originally isolated from poultry deep litter. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the actinobacterial family Dermabacteraceae, and the 3,614,992 bp long single replicon genome with its 3129 protein-coding and 69 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-07-20 /pmc/articles/PMC3035206/ /pubmed/21304631 http://dx.doi.org/10.4056/sigs.492 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Lapidus, Alla
Pukall, Rüdiger
LaButtii, Kurt
Copeland, Alex
Del Rio, Tijana Glavina
Nolan, Matt
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Rohde, Manfred
Göker, Markus
Pati, Amrita
Ivanova, Natalia
Mavrommatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
D'haeseleer, Patrik
Chain, Patrick
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))
title Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))
title_full Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))
title_fullStr Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))
title_full_unstemmed Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))
title_short Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10(T))
title_sort complete genome sequence of brachybacterium faecium type strain (schefferle 6-10(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035206/
https://www.ncbi.nlm.nih.gov/pubmed/21304631
http://dx.doi.org/10.4056/sigs.492
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