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Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T))
Beutenbergia cavernae (Groth et al. 1999) is the type species of the genus and is of phylogenetic interest because of its isolated location in the actinobacterial suborder Micrococcineae. B. cavernae HKI 0122(T) is a Gram-positive, non-motile, non-spore-forming bacterium isolated from a cave in Guan...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2009
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035217/ https://www.ncbi.nlm.nih.gov/pubmed/21304633 http://dx.doi.org/10.4056/sigs.1162 |
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author | Land, Miriam Pukall, Rüdiger Abt, Birte Göker, Markus Rohde, Manfred Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jefferies, Cynthia C. Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_facet | Land, Miriam Pukall, Rüdiger Abt, Birte Göker, Markus Rohde, Manfred Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jefferies, Cynthia C. Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_sort | Land, Miriam |
collection | PubMed |
description | Beutenbergia cavernae (Groth et al. 1999) is the type species of the genus and is of phylogenetic interest because of its isolated location in the actinobacterial suborder Micrococcineae. B. cavernae HKI 0122(T) is a Gram-positive, non-motile, non-spore-forming bacterium isolated from a cave in Guangxi (China). B. cavernae grows best under aerobic conditions and shows a rod-coccus growth cycle. Its cell wall peptidoglycan contains the diagnostic L-lysine ← L-glutamate interpeptide bridge. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the poorly populated micrococcineal family Beutenbergiaceae, and this 4,669,183 bp long single replicon genome with its 4225 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035217 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352172011-02-08 Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) Land, Miriam Pukall, Rüdiger Abt, Birte Göker, Markus Rohde, Manfred Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jefferies, Cynthia C. Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Beutenbergia cavernae (Groth et al. 1999) is the type species of the genus and is of phylogenetic interest because of its isolated location in the actinobacterial suborder Micrococcineae. B. cavernae HKI 0122(T) is a Gram-positive, non-motile, non-spore-forming bacterium isolated from a cave in Guangxi (China). B. cavernae grows best under aerobic conditions and shows a rod-coccus growth cycle. Its cell wall peptidoglycan contains the diagnostic L-lysine ← L-glutamate interpeptide bridge. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the poorly populated micrococcineal family Beutenbergiaceae, and this 4,669,183 bp long single replicon genome with its 4225 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-07-20 /pmc/articles/PMC3035217/ /pubmed/21304633 http://dx.doi.org/10.4056/sigs.1162 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Land, Miriam Pukall, Rüdiger Abt, Birte Göker, Markus Rohde, Manfred Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Hauser, Loren Chang, Yun-Juan Jefferies, Cynthia C. Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Chain, Patrick Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) |
title | Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) |
title_full | Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) |
title_fullStr | Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) |
title_full_unstemmed | Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) |
title_short | Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122(T)) |
title_sort | complete genome sequence of beutenbergia cavernae type strain (hki 0122(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035217/ https://www.ncbi.nlm.nih.gov/pubmed/21304633 http://dx.doi.org/10.4056/sigs.1162 |
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