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Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T))
Acidimicrobium ferrooxidans (Clark and Norris 1996) is the sole and type species of the genus, which until recently was the only genus within the actinobacterial family Acidimicrobiaceae and in the order Acidomicrobiales. Rapid oxidation of iron pyrite during autotrophic growth in the absence of an...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035218/ https://www.ncbi.nlm.nih.gov/pubmed/21304635 http://dx.doi.org/10.4056/sigs.1463 |
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author | Clum, Alicia Nolan, Matt Lang, Elke Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavrommatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Göker, Markus Spring, Stefan Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Chain, Patrick Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_facet | Clum, Alicia Nolan, Matt Lang, Elke Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavrommatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Göker, Markus Spring, Stefan Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Chain, Patrick Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla |
author_sort | Clum, Alicia |
collection | PubMed |
description | Acidimicrobium ferrooxidans (Clark and Norris 1996) is the sole and type species of the genus, which until recently was the only genus within the actinobacterial family Acidimicrobiaceae and in the order Acidomicrobiales. Rapid oxidation of iron pyrite during autotrophic growth in the absence of an enhanced CO(2) concentration is characteristic for A. ferrooxidans. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the order Acidomicrobiales, and the 2,158,157 bp long single replicon genome with its 2038 protein coding and 54 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352182011-02-08 Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) Clum, Alicia Nolan, Matt Lang, Elke Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavrommatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Göker, Markus Spring, Stefan Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Chain, Patrick Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Acidimicrobium ferrooxidans (Clark and Norris 1996) is the sole and type species of the genus, which until recently was the only genus within the actinobacterial family Acidimicrobiaceae and in the order Acidomicrobiales. Rapid oxidation of iron pyrite during autotrophic growth in the absence of an enhanced CO(2) concentration is characteristic for A. ferrooxidans. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the order Acidomicrobiales, and the 2,158,157 bp long single replicon genome with its 2038 protein coding and 54 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-07-20 /pmc/articles/PMC3035218/ /pubmed/21304635 http://dx.doi.org/10.4056/sigs.1463 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Clum, Alicia Nolan, Matt Lang, Elke Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavrommatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Göker, Markus Spring, Stefan Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia C. Chain, Patrick Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Lapidus, Alla Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) |
title | Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) |
title_full | Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) |
title_fullStr | Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) |
title_full_unstemmed | Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) |
title_short | Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP(T)) |
title_sort | complete genome sequence of acidimicrobium ferrooxidans type strain (icp(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035218/ https://www.ncbi.nlm.nih.gov/pubmed/21304635 http://dx.doi.org/10.4056/sigs.1463 |
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