Cargando…
Complete genome sequence of Anaerococcus prevotii type strain (PC1(T))
Anaerococcus prevotii (Foubert and Douglas 1948) Ezaki et al. 2001 is the type species of the genus, and is of phylogenetic interest because of its arguable assignment to the provisionally arranged family ‘Peptostreptococcaceae’. A. prevotii is an obligate anaerobic coccus, usually arranged in clump...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Michigan State University
2009
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035230/ https://www.ncbi.nlm.nih.gov/pubmed/21304652 http://dx.doi.org/10.4056/sigs.24194 |
_version_ | 1782197741500235776 |
---|---|
author | LaButti, Kurt Pukall, Rudiger Steenblock, Katja Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Lapidus, Alla |
author_facet | LaButti, Kurt Pukall, Rudiger Steenblock, Katja Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Lapidus, Alla |
author_sort | LaButti, Kurt |
collection | PubMed |
description | Anaerococcus prevotii (Foubert and Douglas 1948) Ezaki et al. 2001 is the type species of the genus, and is of phylogenetic interest because of its arguable assignment to the provisionally arranged family ‘Peptostreptococcaceae’. A. prevotii is an obligate anaerobic coccus, usually arranged in clumps or tetrads. The strain, whose genome is described here, was originally isolated from human plasma; other strains of the species were also isolated from clinical specimen. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the genus. Next to Finegoldia magna, A. prevotii is only the second species from the family ‘Peptostreptococcaceae’ for which a complete genome sequence is described. The 1,998,633 bp long genome (chromosome and one plasmid) with its 1852 protein-coding and 61 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035230 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352302011-02-08 Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) LaButti, Kurt Pukall, Rudiger Steenblock, Katja Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Lapidus, Alla Stand Genomic Sci Short Genome Reports Anaerococcus prevotii (Foubert and Douglas 1948) Ezaki et al. 2001 is the type species of the genus, and is of phylogenetic interest because of its arguable assignment to the provisionally arranged family ‘Peptostreptococcaceae’. A. prevotii is an obligate anaerobic coccus, usually arranged in clumps or tetrads. The strain, whose genome is described here, was originally isolated from human plasma; other strains of the species were also isolated from clinical specimen. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the genus. Next to Finegoldia magna, A. prevotii is only the second species from the family ‘Peptostreptococcaceae’ for which a complete genome sequence is described. The 1,998,633 bp long genome (chromosome and one plasmid) with its 1852 protein-coding and 61 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-09-24 /pmc/articles/PMC3035230/ /pubmed/21304652 http://dx.doi.org/10.4056/sigs.24194 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports LaButti, Kurt Pukall, Rudiger Steenblock, Katja Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Saunders, Elizabeth Brettin, Thomas Detter, John C. Han, Cliff Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Lapidus, Alla Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) |
title | Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) |
title_full | Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) |
title_fullStr | Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) |
title_full_unstemmed | Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) |
title_short | Complete genome sequence of Anaerococcus prevotii type strain (PC1(T)) |
title_sort | complete genome sequence of anaerococcus prevotii type strain (pc1(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035230/ https://www.ncbi.nlm.nih.gov/pubmed/21304652 http://dx.doi.org/10.4056/sigs.24194 |
work_keys_str_mv | AT labuttikurt completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT pukallrudiger completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT steenblockkatja completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT glavinadelriotijana completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT ticehope completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT copelandalex completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT chengjanfang completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT lucassusan completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT chenfeng completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT nolanmatt completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT brucedavid completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT goodwinlynne completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT pitlucksam completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT ivanovanatalia completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT mavromatiskonstantinos completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT ovchinnikovagalina completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT patiamrita completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT chenamy completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT palaniappankrishna completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT landmiriam completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT hauserloren completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT changyunjuan completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT jeffriescynthiad completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT chainpatrick completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT saunderselizabeth completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT brettinthomas completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT detterjohnc completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT hancliff completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT gokermarkus completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT bristowjim completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT eisenjonathana completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT markowitzvictor completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT hugenholtzphilip completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT kyrpidesnikosc completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT klenkhanspeter completegenomesequenceofanaerococcusprevotiitypestrainpc1t AT lapidusalla completegenomesequenceofanaerococcusprevotiitypestrainpc1t |