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Complete genome sequence of Rhodothermus marinus type strain (R-10(T))

Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot...

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Autores principales: Nolan, Matt, Tindall, Brian J., Pomrenke, Helga, Lapidus, Alla, Copeland, Alex, Glavina Del Rio, Tijana, Lucas, Susan, Chen, Feng, Tice, Hope, Cheng, Jan-Fang, Saunders, Elizabeth, Han, Cliff, Bruce, David, Goodwin, Lynne, Chain, Patrick, Pitluck, Sam, Ovchinikova, Galina, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brettin, Thomas, Göker, Markus, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Detter, John C.
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035238/
https://www.ncbi.nlm.nih.gov/pubmed/21304669
http://dx.doi.org/10.4056/sigs.46736
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author Nolan, Matt
Tindall, Brian J.
Pomrenke, Helga
Lapidus, Alla
Copeland, Alex
Glavina Del Rio, Tijana
Lucas, Susan
Chen, Feng
Tice, Hope
Cheng, Jan-Fang
Saunders, Elizabeth
Han, Cliff
Bruce, David
Goodwin, Lynne
Chain, Patrick
Pitluck, Sam
Ovchinikova, Galina
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brettin, Thomas
Göker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Detter, John C.
author_facet Nolan, Matt
Tindall, Brian J.
Pomrenke, Helga
Lapidus, Alla
Copeland, Alex
Glavina Del Rio, Tijana
Lucas, Susan
Chen, Feng
Tice, Hope
Cheng, Jan-Fang
Saunders, Elizabeth
Han, Cliff
Bruce, David
Goodwin, Lynne
Chain, Patrick
Pitluck, Sam
Ovchinikova, Galina
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brettin, Thomas
Göker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Detter, John C.
author_sort Nolan, Matt
collection PubMed
description Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10(T) is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352382011-02-08 Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) Nolan, Matt Tindall, Brian J. Pomrenke, Helga Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Lucas, Susan Chen, Feng Tice, Hope Cheng, Jan-Fang Saunders, Elizabeth Han, Cliff Bruce, David Goodwin, Lynne Chain, Patrick Pitluck, Sam Ovchinikova, Galina Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Brettin, Thomas Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. Stand Genomic Sci Short Genome Reports Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10(T) is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-12-29 /pmc/articles/PMC3035238/ /pubmed/21304669 http://dx.doi.org/10.4056/sigs.46736 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Nolan, Matt
Tindall, Brian J.
Pomrenke, Helga
Lapidus, Alla
Copeland, Alex
Glavina Del Rio, Tijana
Lucas, Susan
Chen, Feng
Tice, Hope
Cheng, Jan-Fang
Saunders, Elizabeth
Han, Cliff
Bruce, David
Goodwin, Lynne
Chain, Patrick
Pitluck, Sam
Ovchinikova, Galina
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brettin, Thomas
Göker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Detter, John C.
Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
title Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
title_full Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
title_fullStr Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
title_full_unstemmed Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
title_short Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
title_sort complete genome sequence of rhodothermus marinus type strain (r-10(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035238/
https://www.ncbi.nlm.nih.gov/pubmed/21304669
http://dx.doi.org/10.4056/sigs.46736
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