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Complete genome sequence of Rhodothermus marinus type strain (R-10(T))
Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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Michigan State University
2009
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035238/ https://www.ncbi.nlm.nih.gov/pubmed/21304669 http://dx.doi.org/10.4056/sigs.46736 |
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author | Nolan, Matt Tindall, Brian J. Pomrenke, Helga Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Lucas, Susan Chen, Feng Tice, Hope Cheng, Jan-Fang Saunders, Elizabeth Han, Cliff Bruce, David Goodwin, Lynne Chain, Patrick Pitluck, Sam Ovchinikova, Galina Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Brettin, Thomas Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. |
author_facet | Nolan, Matt Tindall, Brian J. Pomrenke, Helga Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Lucas, Susan Chen, Feng Tice, Hope Cheng, Jan-Fang Saunders, Elizabeth Han, Cliff Bruce, David Goodwin, Lynne Chain, Patrick Pitluck, Sam Ovchinikova, Galina Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Brettin, Thomas Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. |
author_sort | Nolan, Matt |
collection | PubMed |
description | Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10(T) is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
format | Text |
id | pubmed-3035238 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2009 |
publisher | Michigan State University |
record_format | MEDLINE/PubMed |
spelling | pubmed-30352382011-02-08 Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) Nolan, Matt Tindall, Brian J. Pomrenke, Helga Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Lucas, Susan Chen, Feng Tice, Hope Cheng, Jan-Fang Saunders, Elizabeth Han, Cliff Bruce, David Goodwin, Lynne Chain, Patrick Pitluck, Sam Ovchinikova, Galina Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Brettin, Thomas Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. Stand Genomic Sci Short Genome Reports Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from marine hot springs off the coast of Iceland. Strain R-10(T) is strictly aerobic and requires slightly halophilic conditions for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Rhodothermus, and only the second sequence from members of the family Rhodothermaceae. The 3,386,737 bp genome (including a 125 kb plasmid) with its 2914 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-12-29 /pmc/articles/PMC3035238/ /pubmed/21304669 http://dx.doi.org/10.4056/sigs.46736 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Short Genome Reports Nolan, Matt Tindall, Brian J. Pomrenke, Helga Lapidus, Alla Copeland, Alex Glavina Del Rio, Tijana Lucas, Susan Chen, Feng Tice, Hope Cheng, Jan-Fang Saunders, Elizabeth Han, Cliff Bruce, David Goodwin, Lynne Chain, Patrick Pitluck, Sam Ovchinikova, Galina Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Brettin, Thomas Göker, Markus Bristow, James Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) |
title | Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) |
title_full | Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) |
title_fullStr | Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) |
title_full_unstemmed | Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) |
title_short | Complete genome sequence of Rhodothermus marinus type strain (R-10(T)) |
title_sort | complete genome sequence of rhodothermus marinus type strain (r-10(t)) |
topic | Short Genome Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035238/ https://www.ncbi.nlm.nih.gov/pubmed/21304669 http://dx.doi.org/10.4056/sigs.46736 |
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