Cargando…

Complete genome sequence of Kangiella koreensis type strain (SW-125(T))

Kangiella koreensis (Yoon et al. 2004) is the type species of the genus and is of phylogenetic interest because of the very isolated location of the genus Kangiella in the gammaproteobacterial order Oceanospirillales. K. koreensis SW-125(T) is a Gram-negative, non-motile, non-spore-forming bacterium...

Descripción completa

Detalles Bibliográficos
Autores principales: Han, Cliff, Sikorski, Johannes, Lapidus, Alla, Nolan, Matt, Glavina Del Rio, Tijana, Tice, Hope, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Copeland, Alex, Ivanova, Natalia, Mavromatis, Konstantinos, Ovchinnikova, Galina, Pati, Amrita, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick, Saunders, Elizabeth, Brettin, Thomas, Göker, Markus, Tindall, Brian J., Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter, Detter, John C.
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035244/
https://www.ncbi.nlm.nih.gov/pubmed/21304661
http://dx.doi.org/10.4056/sigs.36635
_version_ 1782197744835756032
author Han, Cliff
Sikorski, Johannes
Lapidus, Alla
Nolan, Matt
Glavina Del Rio, Tijana
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Copeland, Alex
Ivanova, Natalia
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Saunders, Elizabeth
Brettin, Thomas
Göker, Markus
Tindall, Brian J.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Detter, John C.
author_facet Han, Cliff
Sikorski, Johannes
Lapidus, Alla
Nolan, Matt
Glavina Del Rio, Tijana
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Copeland, Alex
Ivanova, Natalia
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Saunders, Elizabeth
Brettin, Thomas
Göker, Markus
Tindall, Brian J.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Detter, John C.
author_sort Han, Cliff
collection PubMed
description Kangiella koreensis (Yoon et al. 2004) is the type species of the genus and is of phylogenetic interest because of the very isolated location of the genus Kangiella in the gammaproteobacterial order Oceanospirillales. K. koreensis SW-125(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from tidal flat sediments at Daepo Beach, Yellow Sea, Korea. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the genus Kangiella and only the fourth genome from the order Oceanospirillales. This 2,852,073 bp long single replicon genome with its 2647 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
format Text
id pubmed-3035244
institution National Center for Biotechnology Information
language English
publishDate 2009
publisher Michigan State University
record_format MEDLINE/PubMed
spelling pubmed-30352442011-02-08 Complete genome sequence of Kangiella koreensis type strain (SW-125(T)) Han, Cliff Sikorski, Johannes Lapidus, Alla Nolan, Matt Glavina Del Rio, Tijana Tice, Hope Cheng, Jan-Fang Lucas, Susan Chen, Feng Copeland, Alex Ivanova, Natalia Mavromatis, Konstantinos Ovchinnikova, Galina Pati, Amrita Bruce, David Goodwin, Lynne Pitluck, Sam Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Saunders, Elizabeth Brettin, Thomas Göker, Markus Tindall, Brian J. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Detter, John C. Stand Genomic Sci Short Genome Reports Kangiella koreensis (Yoon et al. 2004) is the type species of the genus and is of phylogenetic interest because of the very isolated location of the genus Kangiella in the gammaproteobacterial order Oceanospirillales. K. koreensis SW-125(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated from tidal flat sediments at Daepo Beach, Yellow Sea, Korea. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the genus Kangiella and only the fourth genome from the order Oceanospirillales. This 2,852,073 bp long single replicon genome with its 2647 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-11-22 /pmc/articles/PMC3035244/ /pubmed/21304661 http://dx.doi.org/10.4056/sigs.36635 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Han, Cliff
Sikorski, Johannes
Lapidus, Alla
Nolan, Matt
Glavina Del Rio, Tijana
Tice, Hope
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Copeland, Alex
Ivanova, Natalia
Mavromatis, Konstantinos
Ovchinnikova, Galina
Pati, Amrita
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Saunders, Elizabeth
Brettin, Thomas
Göker, Markus
Tindall, Brian J.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Detter, John C.
Complete genome sequence of Kangiella koreensis type strain (SW-125(T))
title Complete genome sequence of Kangiella koreensis type strain (SW-125(T))
title_full Complete genome sequence of Kangiella koreensis type strain (SW-125(T))
title_fullStr Complete genome sequence of Kangiella koreensis type strain (SW-125(T))
title_full_unstemmed Complete genome sequence of Kangiella koreensis type strain (SW-125(T))
title_short Complete genome sequence of Kangiella koreensis type strain (SW-125(T))
title_sort complete genome sequence of kangiella koreensis type strain (sw-125(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035244/
https://www.ncbi.nlm.nih.gov/pubmed/21304661
http://dx.doi.org/10.4056/sigs.36635
work_keys_str_mv AT hancliff completegenomesequenceofkangiellakoreensistypestrainsw125t
AT sikorskijohannes completegenomesequenceofkangiellakoreensistypestrainsw125t
AT lapidusalla completegenomesequenceofkangiellakoreensistypestrainsw125t
AT nolanmatt completegenomesequenceofkangiellakoreensistypestrainsw125t
AT glavinadelriotijana completegenomesequenceofkangiellakoreensistypestrainsw125t
AT ticehope completegenomesequenceofkangiellakoreensistypestrainsw125t
AT chengjanfang completegenomesequenceofkangiellakoreensistypestrainsw125t
AT lucassusan completegenomesequenceofkangiellakoreensistypestrainsw125t
AT chenfeng completegenomesequenceofkangiellakoreensistypestrainsw125t
AT copelandalex completegenomesequenceofkangiellakoreensistypestrainsw125t
AT ivanovanatalia completegenomesequenceofkangiellakoreensistypestrainsw125t
AT mavromatiskonstantinos completegenomesequenceofkangiellakoreensistypestrainsw125t
AT ovchinnikovagalina completegenomesequenceofkangiellakoreensistypestrainsw125t
AT patiamrita completegenomesequenceofkangiellakoreensistypestrainsw125t
AT brucedavid completegenomesequenceofkangiellakoreensistypestrainsw125t
AT goodwinlynne completegenomesequenceofkangiellakoreensistypestrainsw125t
AT pitlucksam completegenomesequenceofkangiellakoreensistypestrainsw125t
AT chenamy completegenomesequenceofkangiellakoreensistypestrainsw125t
AT palaniappankrishna completegenomesequenceofkangiellakoreensistypestrainsw125t
AT landmiriam completegenomesequenceofkangiellakoreensistypestrainsw125t
AT hauserloren completegenomesequenceofkangiellakoreensistypestrainsw125t
AT changyunjuan completegenomesequenceofkangiellakoreensistypestrainsw125t
AT jeffriescynthiad completegenomesequenceofkangiellakoreensistypestrainsw125t
AT chainpatrick completegenomesequenceofkangiellakoreensistypestrainsw125t
AT saunderselizabeth completegenomesequenceofkangiellakoreensistypestrainsw125t
AT brettinthomas completegenomesequenceofkangiellakoreensistypestrainsw125t
AT gokermarkus completegenomesequenceofkangiellakoreensistypestrainsw125t
AT tindallbrianj completegenomesequenceofkangiellakoreensistypestrainsw125t
AT bristowjim completegenomesequenceofkangiellakoreensistypestrainsw125t
AT eisenjonathana completegenomesequenceofkangiellakoreensistypestrainsw125t
AT markowitzvictor completegenomesequenceofkangiellakoreensistypestrainsw125t
AT hugenholtzphilip completegenomesequenceofkangiellakoreensistypestrainsw125t
AT kyrpidesnikosc completegenomesequenceofkangiellakoreensistypestrainsw125t
AT klenkhanspeter completegenomesequenceofkangiellakoreensistypestrainsw125t
AT detterjohnc completegenomesequenceofkangiellakoreensistypestrainsw125t