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Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))

Stackebrandtia nassauensis Labeda and Kroppenstedt (2005) is the type species of the genus Stackebrandtia, and a member of the actinobacterial family Glycomycetaceae. Stackebrandtia currently contains two species, which are differentiated from Glycomyces spp. by cellular fatty acid and menaquinone c...

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Autores principales: Munk, Chris, Lapidus, Alla, Copeland, Alex, Jando, Marlen, Mayilraj, Shanmugam, Glavina Del Rio, Tijana, Nolan, Matt, Chen, Feng, Lucas, Susan, Tice, Hope, Cheng, Jan-Fang, Han, Cliff, Detter, John C., Bruce, David, Goodwin, Lynne, Chain, Patrick, Pitluck, Sam, Göker, Markus, Ovchinikova, Galina, Pati, Amrita, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035245/
https://www.ncbi.nlm.nih.gov/pubmed/21304662
http://dx.doi.org/10.4056/sigs.47643
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author Munk, Chris
Lapidus, Alla
Copeland, Alex
Jando, Marlen
Mayilraj, Shanmugam
Glavina Del Rio, Tijana
Nolan, Matt
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Detter, John C.
Bruce, David
Goodwin, Lynne
Chain, Patrick
Pitluck, Sam
Göker, Markus
Ovchinikova, Galina
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_facet Munk, Chris
Lapidus, Alla
Copeland, Alex
Jando, Marlen
Mayilraj, Shanmugam
Glavina Del Rio, Tijana
Nolan, Matt
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Detter, John C.
Bruce, David
Goodwin, Lynne
Chain, Patrick
Pitluck, Sam
Göker, Markus
Ovchinikova, Galina
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
author_sort Munk, Chris
collection PubMed
description Stackebrandtia nassauensis Labeda and Kroppenstedt (2005) is the type species of the genus Stackebrandtia, and a member of the actinobacterial family Glycomycetaceae. Stackebrandtia currently contains two species, which are differentiated from Glycomyces spp. by cellular fatty acid and menaquinone composition. Strain LLR-40K-21(T) is Gram-positive, aerobic, and nonmotile, with a branched substrate mycelium and on some media an aerial mycelium. The strain was originally isolated from a soil sample collected from a road side in Nassau, Bahamas. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of the actinobacterial suborder Glycomycineae. The 6,841,557 bp long single replicon genome with its 6487 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352452011-02-08 Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T)) Munk, Chris Lapidus, Alla Copeland, Alex Jando, Marlen Mayilraj, Shanmugam Glavina Del Rio, Tijana Nolan, Matt Chen, Feng Lucas, Susan Tice, Hope Cheng, Jan-Fang Han, Cliff Detter, John C. Bruce, David Goodwin, Lynne Chain, Patrick Pitluck, Sam Göker, Markus Ovchinikova, Galina Pati, Amrita Ivanova, Natalia Mavromatis, Konstantinos Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C. Klenk, Hans-Peter Stand Genomic Sci Short Genome Reports Stackebrandtia nassauensis Labeda and Kroppenstedt (2005) is the type species of the genus Stackebrandtia, and a member of the actinobacterial family Glycomycetaceae. Stackebrandtia currently contains two species, which are differentiated from Glycomyces spp. by cellular fatty acid and menaquinone composition. Strain LLR-40K-21(T) is Gram-positive, aerobic, and nonmotile, with a branched substrate mycelium and on some media an aerial mycelium. The strain was originally isolated from a soil sample collected from a road side in Nassau, Bahamas. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of the actinobacterial suborder Glycomycineae. The 6,841,557 bp long single replicon genome with its 6487 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-12-30 /pmc/articles/PMC3035245/ /pubmed/21304662 http://dx.doi.org/10.4056/sigs.47643 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Munk, Chris
Lapidus, Alla
Copeland, Alex
Jando, Marlen
Mayilraj, Shanmugam
Glavina Del Rio, Tijana
Nolan, Matt
Chen, Feng
Lucas, Susan
Tice, Hope
Cheng, Jan-Fang
Han, Cliff
Detter, John C.
Bruce, David
Goodwin, Lynne
Chain, Patrick
Pitluck, Sam
Göker, Markus
Ovchinikova, Galina
Pati, Amrita
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))
title Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))
title_full Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))
title_fullStr Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))
title_full_unstemmed Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))
title_short Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21(T))
title_sort complete genome sequence of stackebrandtia nassauensis type strain (llr-40k-21(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035245/
https://www.ncbi.nlm.nih.gov/pubmed/21304662
http://dx.doi.org/10.4056/sigs.47643
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