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Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))

Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfate-reducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide....

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Autores principales: Spring, Stefan, Lapidus, Alla, Schröder, Maren, Gleim, Dorothea, Sims, David, Meincke, Linda, Glavina Del Rio, Tijana, Tice, Hope, Copeland, Alex, Cheng, Jan-Fang, Lucas, Susan, Chen, Feng, Nolan, Matt, Bruce, David, Goodwin, Lynne, Pitluck, Sam, Ivanova, Natalia, Mavromatis, Konstantinos, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Chain, Patrick, Saunders, Elizabeth, Brettin, Thomas, Detter, John C., Göker, Markus, Bristow, Jim, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C, Klenk, Hans-Peter, Han, Cliff
Formato: Texto
Lenguaje:English
Publicado: Michigan State University 2009
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035247/
https://www.ncbi.nlm.nih.gov/pubmed/21304664
http://dx.doi.org/10.4056/sigs.39508
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author Spring, Stefan
Lapidus, Alla
Schröder, Maren
Gleim, Dorothea
Sims, David
Meincke, Linda
Glavina Del Rio, Tijana
Tice, Hope
Copeland, Alex
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Saunders, Elizabeth
Brettin, Thomas
Detter, John C.
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Han, Cliff
author_facet Spring, Stefan
Lapidus, Alla
Schröder, Maren
Gleim, Dorothea
Sims, David
Meincke, Linda
Glavina Del Rio, Tijana
Tice, Hope
Copeland, Alex
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Saunders, Elizabeth
Brettin, Thomas
Detter, John C.
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Han, Cliff
author_sort Spring, Stefan
collection PubMed
description Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfate-reducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide. All available data about this species are based on strain 5575(T), isolated from piggery waste in Germany. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a Desulfotomaculum species with validly published name. The 4,545,624 bp long single replicon genome with its 4370 protein-coding and 100 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
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spelling pubmed-30352472011-02-08 Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T)) Spring, Stefan Lapidus, Alla Schröder, Maren Gleim, Dorothea Sims, David Meincke, Linda Glavina Del Rio, Tijana Tice, Hope Copeland, Alex Cheng, Jan-Fang Lucas, Susan Chen, Feng Nolan, Matt Bruce, David Goodwin, Lynne Pitluck, Sam Ivanova, Natalia Mavromatis, Konstantinos Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Hauser, Loren Chang, Yun-Juan Jeffries, Cynthia D. Chain, Patrick Saunders, Elizabeth Brettin, Thomas Detter, John C. Göker, Markus Bristow, Jim Eisen, Jonathan A. Markowitz, Victor Hugenholtz, Philip Kyrpides, Nikos C Klenk, Hans-Peter Han, Cliff Stand Genomic Sci Short Genome Reports Desulfotomaculum acetoxidans Widdel and Pfennig 1977 was one of the first sulfate-reducing bacteria known to grow with acetate as sole energy and carbon source. It is able to oxidize substrates completely to carbon dioxide with sulfate as the electron acceptor, which is reduced to hydrogen sulfide. All available data about this species are based on strain 5575(T), isolated from piggery waste in Germany. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a Desulfotomaculum species with validly published name. The 4,545,624 bp long single replicon genome with its 4370 protein-coding and 100 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. Michigan State University 2009-11-22 /pmc/articles/PMC3035247/ /pubmed/21304664 http://dx.doi.org/10.4056/sigs.39508 Text en http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Short Genome Reports
Spring, Stefan
Lapidus, Alla
Schröder, Maren
Gleim, Dorothea
Sims, David
Meincke, Linda
Glavina Del Rio, Tijana
Tice, Hope
Copeland, Alex
Cheng, Jan-Fang
Lucas, Susan
Chen, Feng
Nolan, Matt
Bruce, David
Goodwin, Lynne
Pitluck, Sam
Ivanova, Natalia
Mavromatis, Konstantinos
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Chain, Patrick
Saunders, Elizabeth
Brettin, Thomas
Detter, John C.
Göker, Markus
Bristow, Jim
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Han, Cliff
Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))
title Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))
title_full Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))
title_fullStr Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))
title_full_unstemmed Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))
title_short Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575(T))
title_sort complete genome sequence of desulfotomaculum acetoxidans type strain (5575(t))
topic Short Genome Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3035247/
https://www.ncbi.nlm.nih.gov/pubmed/21304664
http://dx.doi.org/10.4056/sigs.39508
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